barSeed - Barley Seed Development Database

Probe ABC11562

Source Contig ABC11562

barSeed

Links

Affymetrix Source Sequence (630 bp)

>ABC11562 630
ATCGTCACAACCGACAAGCTGCAATATCCAAATCATTCTTCTTTCGGCGACGCCATTGAC
AGAGGCGGCCATGGAGAAGGGGAAGGCCCCAGCGGATGCAGCGGAGCCGGCCGCGGCGTG
TGCAGCGCGGCTGGCGCGTGAGTGGAGCACTTGGGCGATGAAGAACGCGAAGGTGGTCGC
GCACTACGGCTTCATCCCCCTTGTCATCCTCGTCGGCATGAGGTCCGAACCCAAGCCCAG
CCTCGCCCAGCTCCTCTCCCCCGTGTAGCTCTGTTCCCCGAGCGGATCCGCACGGCTGTG
CGCGTATTGAGTTGATCTAATTTTGTATTTTTCCCTGAATAATTTCTACTCATTACTCTT
TGGAAGTTTGGGTTGCTCTGATTTTGGGTCTCCCTATTGCCACCGAGAGCCTACTGTATG
GCTGTATTAGGCTACGGGCAATTGTGCGGTGGTTTATAAGATTTTTGCTAAGAGCTGTAC
CGCCAGAATGTATTACAGTCTCAAGGACGTGTTCGTGTTTCTTGTTTCACCCTTTGACAT
TGGAGATGTCGCCGTGGGAGCAAGCACACGGGCAATTGTGCGGTGGTTTATAAGATTCTT
GCCCGTGTGGTTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_77330.2	894	0.0	233 - 845	99	613 / 614	None	ABC11562
AK358243	3906	0.0	2001 - 2488	99	486 / 488	CUST_34228_PI390587928 CUST_13277_PI390587928	ABC09322 ABC11562 ABC12169 ABC15296 ABC23889 ABC45897
MLOC_77330.1	254	2e-113	25 - 246	100	222 / 222	None	ABC11562