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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_3405_PI390587928Hv_44K_v2CGTCGCTTGATTTGGGAAGAAAATTTCATTTTCCCTTGTATAATTTCTGATCTGAATGGT370GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK37400842002e-24428 - 48710060 / 60plus ABC09305 ABC37834 ABC37835
MLOCMLOC_3671.518132e-241229 - 128810060 / 60minus ABC15525 ABC37834 ABC37835
MLOCMLOC_3671.610622e-24487 - 54610060 / 60minus ABC15525 ABC37834 ABC37835
MLOCMLOC_3671.216632e-241087 - 114610060 / 60minus ABC15525 ABC37834 ABC37835
MLOCMLOC_3671.311902e-24614 - 67310060 / 60minus ABC15525 ABC37834 ABC37835
MLOCMLOC_3671.110442e-24472 - 53110060 / 60minus ABC15525 ABC37834 ABC37835
MLOCMLOC_2296.212503e-21451 - 5119759 / 61plus ABC37834
JLOC1JLOC1_1376.19632e-21451 - 5119759 / 61plus
Harvest21ABC378344613e-25371 - 43010060 / 60plusABC37834
Harvest35U35_118614613e-25371 - 43010060 / 60plus



Contig Sequence (461 bp)

>U35_11861 461 Hv_44K_v2
GGCGCCGACGATGACGACTTTGTCGGTGAGCTCCGGCAGCCATGGCCGGCGTGCAGGACG
TTGCTGAGCTCACGTAGCCATGCTGCGTTGATCCCTCTGCCCAGATCCGTCCATCACTGC
CTACAATACGCGTGCCCAATCCACCCCCGCGGTTAGGGTTTGGGGTGCGACCACGTCTCC
GCCACCTGCGTGCCTCTGGCGAGCTCCGACGGCCATGGCCGGCACGCAGGATGCTGCCGA
GGTCACCTCGTCGTGCTGCGTTGATCCATCCAAGTAGATCCGTCCCTCCATGCCTCCAAC
ACTCGCGCCCAATCCATCTGTGATTAGGGTTTGGGGGCACGGCCTCGTCTCCGCCACTGG
CGGTCTTCTACGTCGCTTGATTTGGGAAGAAAATTTCATTTTCCCTTGTATAATTTCTGA
TCTGAATGGTTTGTTTTTAGGGGCAAAAAAAAAAAAAAAAA



Homology of Contig U35_11861 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None