barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_33264_PI390587928Hv_44K_v2TTTCATGCGCAGTACCTTCAGCAGGACAAACCTCTGGCTCCAAATCAAAACGGTAATTGT250GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_22169.19552e-24561 - 62010060 / 60plus None
MLOCMLOC_22169.27722e-24518 - 57710060 / 60plus None
MLOCMLOC_42016.23707e-23171 - 22710057 / 57minus None
MLOCMLOC_26486.15587e-23308 - 36410057 / 57plus None
MLOCAK37701341459e-22604 - 65810055 / 55minus ABC07052 ABC25353 ABC49807
MLOCMLOC_48385.35019e-22203 - 25710055 / 55minus None
MLOCMLOC_48385.27629e-22205 - 25910055 / 55minus None
MLOCMLOC_48386.21809e-22112 - 16610055 / 55minus None
MLOCMLOC_28865.14523e-21145 - 2019856 / 57minus None
Harvest35U35_79096333e-25251 - 31010060 / 60minus



Contig Sequence (633 bp)

>U35_7909 633 Hv_44K_v2
GAGGGATCTACGACCGCCTGCGGGCCATCGGCAACCAGGAGGCGTTCGCCGACCCCTTCT
TCGACCGCGTGCTCGAAGACCACTACTAACGCCTCCCGCCAAGGTCCGTGCTTTCCGCTC
ACCCCCCGTCCACGCCCGCGTTTTCACCTCACCAACGCCTCTCTCTCTGTCTGTCTGTCT
GTGTCCGCGCGCACCGGGGATGTAGCTACTACATCGACCTCGACGTGAGCATGGAAGCCA
GGGATCCCCCACAATTACCGTTTTGATTTGGAGCCAGAGGTTTGTCCTGCTGAAGGTACT
GCGCATGAAAGCAGAGGACCATAATAACACAGTAAGCGACAGTGTGCAGGGAAGATTTCA
TGAGTTTAATGGATGGATAAATTTACCCTTAGGAATCGGGCATGGAAGACGGGGCGGTTG
TCGGGGTCGGCGCACTCGGCGAGGATCCGGCGGTGGAGCAACACGTCCTCCGCCTTGTTC
ACCAGCGTTCATGCGTGGCATAGTTCTGTAAGAATTGTCAAAAGCGAATGTTTGATTAAA
AACAGATATTTCAGTCATTTATGCCAGCTGATAGTCAGTTTGTATTGCTCTGATTAATGA
GCTCTACAGAGATATCAAAAAAAAAAAAAAAAA



Homology of Contig U35_7909 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None