barSeed - Barley Seed Development Database

Probe ABC49807

Source Contig ABC49807

barSeed

Links

Affymetrix Source Sequence (656 bp)

>ABC49807 656
TCCAAGAGTGAGACAATTGGCAGTGTTGATGCACTAGCAGACATTGAATACACTCTGAAG
TACCAGAACCTAAGACAAGGAATGGATTATTTAGCCCTTAGTCTGAGAAAAGTTAAATCT
GTGTTGGTTGAAAAACACAATAAAGAAGACAACATAGTGGGTGTTTCTGTGGGACATGAT
ACATTATATATTATTGTTGTTCTTGAGTAAAGTGCAGGAAGGCATGAATTCAACGGCGAA
AACTTCTATCAGGATGGGGTCCCTCTAGGCAGGAAGGCATGGACCCAACAGCAAGGACAT
CGATTATGATGGATTCAACCGGACTGCTCGATTACTGAATGACATAATATGGTTATGATG
TGGGTTCATGGAGGTACTCTAGCCCCAACAAAACTATGACTCATCCAACCTTTTCGGGCA
GGTTCACTATTCTTCAATCGTAGTGCTGCATATTCCTATTTGAATGATAGGTGGTGCATA
GAATTAATGATTCAGAAAAATTATTTTTTCTTTGTTACGAACAAGTCTGCAACTCTCCCA
GATAGAAGATTATCACTAAAAGAGAACAACTAATTAGTCTTGGTAGATGAAGTCAGATTG
TGTACTGACATTGTGGTAATCTCTGGTATCCTATTTCTTCCCTGTTATTTGTGTTA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_33170.1	643	0.0	205 - 643	97	429 / 442	None	ABC07052 ABC25353 ABC49807
AK377013	4145	1e-100	1663 - 1873	98	207 / 211	CUST_33264_PI390587928	ABC07052 ABC25353 ABC49807
MLOC_26334.1	331	1e-136	1 - 284	98	280 / 287	None	ABC07052 ABC49807
MLOC_31511.1	337	1e-110	97 - 337	97	234 / 242	None	ABC07052 ABC49807
MLOC_26240.1	181	5e-65	41 - 181	99	139 / 141	None	ABC49807
MLOC_77200.1	329	3e-62	128 - 329	88	188 / 214	None	ABC49807