barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_327_PI415269222Hv_44K_v2CCGCCTCCTCGGCGCCACTCCAGGGCAGCCGCGTCCTGTCCGCCGCGGGCTCGGACCTCG435GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_66806.628662e-24414 - 47310060 / 60plus ABC07937 ABC07938 ABC12639
MLOCMLOC_66806.730802e-24506 - 56510060 / 60plus ABC07937 ABC07938 ABC12639
MLOCMLOC_66806.439952e-241268 - 132710060 / 60plus ABC07937 ABC07938 ABC12639
MLOCMLOC_66806.232252e-24650 - 70910060 / 60plus ABC07937 ABC07938 ABC12639
MLOCMLOC_66806.335792e-24980 - 103910060 / 60plus ABC07937 ABC07938 ABC12639
JLOC1JLOC1_44060.232468e-25626 - 68510060 / 60plus
JLOC1JLOC1_44060.132868e-25666 - 72510060 / 60plus
Harvest21ABC0793772093e-254624 - 468310060 / 60plusABC07937
Harvest35U35_323834653e-25389 - 44810060 / 60plus
Harvest35U35_81435285e-23449 - 5079859 / 60plus
Harvest35U35_1636972626e-224624 - 46839758 / 60plus



Contig Sequence (495 bp)

>TA49296_4513 495 Hv_44K_v2
TGGCCCGGCCGGGCTCCTTGCGCTGCGCCTGCACCGCACACCCGGTGCTCCCCTTCCCTG
CGCGTGCTCCGATGGCGACGCCGTCCGCGGCAGACAACTGTTGTCCACCCCTCGTGACCC
TCCTCCTCATCGTCCTCCTCCCCCTGGCCGTCGCCTTGCCCTCGGGCGATGGCTCCGGCG
GCGGGGGGTACGACGTCGTGTCGGTGACCCAGTCGGGGAGCGCTCTGTCGGCGCGGCTGG
AGCTGGCGCTTGCCGGCGAGACGCCGGCCGACGCGGCGCTCGGGCCTGGTGTCCAGAGGC
TCCGCCTCACTGCAAGCCTCGAGACGGACAGCCGGCTGCGCGTGCGCATCACCGACGCCG
ACCACCCGCGATGGGAGGTGCCGCAAGACATCATCCCGCGCCCCGCGCCGGCGGACGTCC
TCCACGACGCGCCGCCCGCCTCCTCGGCGCCACTCCAGGGCAGCCGCGTCCTGTCCGCCG
CGGGCTCGGACCTCG



Homology of Contig TA49296_4513 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None