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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_32655_PI390587928Hv_44K_v2GGTATACTTGGTAAATACAGCAAAGCAAAGCATGTTAGAGCCACCTCAGTCAGCCTTAAG503GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_68482.145273e-224471 - 452610056 / 56plus ABC02541 ABC37816
MLOCMLOC_68482.346043e-224214 - 426910056 / 56plus ABC02541 ABC37816
MLOCMLOC_68482.245363e-224403 - 445810056 / 56plus ABC02541 ABC37816
MLOCMLOC_68482.546923e-224308 - 436310056 / 56plus ABC02541 ABC37816
MLOCMLOC_68482.446033e-224213 - 426810056 / 56plus ABC02541 ABC37816
JLOC1JLOC1_45311.146451e-224213 - 426810056 / 56plus
Harvest21ABC314596243e-25504 - 56310060 / 60plus
Harvest21ABC0254126535e-231771 - 182610056 / 56plusABC02541
Harvest21ABC378165232e-21272 - 3279855 / 56minusABC37816
Harvest35U35_312966243e-25504 - 56310060 / 60plus
Harvest35U35_1681141825e-233827 - 388210056 / 56plus



Contig Sequence (624 bp)

>U35_31296 624 Hv_44K_v2
CCTGAAGTGACTGCGGTATCCATTGAGCCAAATTTTGCTTCGTATCTTTTCAGCGAGTAT
CTGTCAAATTCGTCAGGCACGATGTTGCCTGAAGGTGTCTTCCTTGGAAGGAACAAGCGG
AAACATTCAAATGATGGCGAGCCTTCAGATTCATTGAAGGCCATGGATGGTATCAAAGTT
GCTAATGGTCTTGAATGCAAGATATCCTGCAAGACCTCCAAGGTCTCCTATGTCCTTGAC
ACCGAAGATTTCTTGTTTCGGTTGAGAAAGAGGAGGAGGCTTTCACCTGGTGGAAACGTG
GCTGACAAGTCACCGACTTCCAAAAAGTATGCTGCAAAAGTGCAGCGCTTCCATTTGTTT
CTATCCAAGCCTTAAGAGGGCCATAGGCAAAAAAAAACATTGACATTGTATCCAAATCGG
GAGATGCCGCTGGGGTTGCGACCGCCTTGCTCTTGCTTCGACAGTGACAAGAATAATAAT
GATCAGCTGGCCGCTGGATAGATGGTATACTTGGTAAATACAGCAAAGCAAAGCATGTTA
GAGCCACCTCAGTCAGCCTTAAGCCGCGCCGAANAAAGATGTGTGTGTGCGTGTCTATTT
GTAAATATGTACTGTCAGAAGAAT



Homology of Contig U35_31296 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os01g01960.113265e-51protein|transcriptional repressor, putative, expressed
Brachypodium v1_2Bradi2g00860.113382e-53
Arabidopsis v10None