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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_32154_PI390587928Hv_44K_v2AGAACCAGGCAAAGGACCTGCTCACTATGAATCTCCAAGATAAGATCAAGGAGTTGGAGT448GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36896528982e-24490 - 54910060 / 60plus ABC04099 ABC04101 ABC04102 ABC38864
MLOCMLOC_49632.13119e-22254 - 3119857 / 58minus ABC04102
JLOC1JLOC1_31753.11195e-221 - 589857 / 58plus
Harvest21ABC249055293e-25449 - 50810060 / 60plus
Harvest35U35_114835293e-25449 - 50810060 / 60plus



Contig Sequence (529 bp)

>U35_11483 529 Hv_44K_v2
GCTCAAGCTCACCTGTGCTGCCGCCGCCGCCCCTCCTCTCCGACGCGACCGTCACCGGAG
CCGCCCTCCTCGCCCGCTCACGCACGCCTCATGCTCCCATGGTTCGCGGCTCCCTCCTGC
TCCAAACCCTAAGCCCCCGTCCCCCTCGCGCCACCTGCTCACCTCTCCCCCTCCATCTCC
CGCGGGACTCCTCCCCGGCCGTCACTACGCCGTCCGCGCCGACCGCGGCCTCCGCCCCGC
CGCTCGAAGACTGACTCCGCCTCCTGCGCGGCGAGCGCGACAGAAGCTGGCGGGCCTCTT
CAGAGTCAACCTCTTCACCTCACCCAGAGTGGATGAAGCTACATCAAGTTCAACAAAAGA
TGCCCGGTTGGGAGAGCCAAGCAGGATTGCAAGAGCAAAGATGCTCAGATCAAGAGCATG
GAAGAAACAATCCAATCCCTTGAAGCCAAGAACCAGGCAAAGGACCTGCTCACTATGAAT
CTCCAAGATAAGATCAAGGAGTTGGAGTCGCAGCTGCTGGTTGAGAGGA



Homology of Contig U35_11483 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None