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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_31994_PI390587928Hv_44K_v2CTGATGTGAACTAGTTTTGATTGTAAACCTGATGCGAACCATGTTTGATTGAAATTTTCC604GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_41063.12892e-24171 - 23010060 / 60plus ABC06045 ABC06046 ABC06047 ABC49812
MLOCMLOC_41063.26582e-24538 - 59710060 / 60plus ABC06045 ABC06046 ABC06047 ABC49812
MLOCMLOC_73669.12039e-2275 - 12910055 / 55plus ABC06045 ABC06046 ABC06047
MLOCMLOC_72785.426279e-222555 - 260910055 / 55plus ABC06045 ABC06046 ABC06047 ABC07418 ABC49812
MLOCMLOC_72785.15999e-22530 - 58410055 / 55plus ABC06045 ABC06046 ABC06047 ABC07418 ABC49812
MLOCMLOC_72785.26029e-22533 - 58710055 / 55plus ABC06045 ABC06046 ABC06047 ABC07418 ABC49812
MLOCMLOC_72785.35649e-22495 - 54910055 / 55plus ABC06045 ABC06046 ABC06047 ABC07418 ABC49812
JLOC1JLOC1_26803.27088e-25528 - 58710060 / 60plus
JLOC1JLOC1_26803.13518e-25171 - 23010060 / 60plus
JLOC1JLOC1_48433.530215e-222945 - 299910055 / 55plus
JLOC1JLOC1_48433.426215e-222545 - 259910055 / 55plus
JLOC1JLOC1_48433.35975e-22521 - 57510055 / 55plus
JLOC1JLOC1_48433.26005e-22524 - 57810055 / 55plus
JLOC1JLOC1_48433.15625e-22486 - 54010055 / 55plus
Harvest21ABC519925563e-25477 - 53610060 / 60plus
Harvest21ABC060477493e-25605 - 66410060 / 60plusABC06047
Harvest21ABC0604514472e-221297 - 135110055 / 55plusABC06045
Harvest21ABC060483448e-21220 - 2749854 / 55plus
Harvest35U35_500025563e-25477 - 53610060 / 60plus
Harvest35U35_165887483e-25605 - 66410060 / 60plus
Harvest35U35_1658514472e-221297 - 135110055 / 55plus
Harvest35U35_165877208e-21574 - 6289854 / 55plus



Contig Sequence (748 bp)

>U35_16588 748 Hv_44K_v2
CTCTCCTACCTAAACCTAACGCACGAAACACCCGCCTGCCTACGTACCGCCGTCCTCTCT
CTCCCTCTCCCAGATCCAGATCGAGGCCCTCGCGTCTCTCCTCTCCCTCCATCTCCGCTG
CAGCCGGCTCCCGCCCAGTCCTCGTCCTCCTCTATCTCCACATCCGCTCAGTCCTCGTCC
TCCGCTGCGGCCCGCATGCTGGAGGAAGCTGGCGGCTAGGCCGGCCACAGAGCAGAGGAA
GGCTGCGGCACACACACAGGGCAGGGACCACACGCGATCGGTCAACGTCACCAGCGGGAG
GTTTCGTCCTCGGGCTCGACATGCCGCCTCCTCCCCGCGCGCGTGCACTCCACCCCCACT
ACCCCCTCCTCTGCCTCCGCCTGCCCGGTCCGGCCCGGCGACGACGACTCCCCCGCGCGG
CTCAAGCGATGAAGCGACAATCCCTTCTACGTGAGGAAACGATTTTACAGTACAAGTTGG
GCAATTTCGAGATGTTGGCCTTCGTTCATGTTTCGTCGCAAGGTCCAGGACGAAGAAGTC
AGGAGAAGCACAGAGTTCTTGATCATTGGAGCTAGTTATTGTTTTGATTTTTTAGTTGTG
TTACCTGATGTGAACTAGTTTTGATTGTAAACCTGATGCGAACCATGTTTGATTGAAATT
TTCCAAGTTTGGATATGTTGAAAAAAAAAAATGATGTGACAGAGGTTCAAGTTATAATGG
TTGTTTGACATAAAAAAAAAAAAAAAAA



Homology of Contig U35_16588 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None