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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_31875_PI390587928Hv_44K_v2TTCACTTGTAAATCAATTTGTTGGGAATCAAAATGGCATGGATGCCACCAAGTTTAAGTG2277GeneList: brown
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.9372.7101.4760.4270.1360.145
Raw 8821.13312387.9635846.4972690.433291.367346.804



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_58270.225002e-2419 - 7810060 / 60minus ABC02493 ABC04521 ABC13653
MLOCMLOC_58270.119062e-2419 - 7810060 / 60minus ABC02493 ABC04521 ABC13653
JLOC1JLOC1_37843.125068e-252332 - 239110060 / 60plus
Harvest21ABC0452515243e-251403 - 146210060 / 60plus
Harvest21ABC045218262e-22750 - 8089858 / 59plusABC04521
Harvest35U35_1565323943e-252278 - 233710060 / 60plus



Contig Sequence (2394 bp)

>U35_15653 2394 Hv_44K_v2
TCGAGCACTGTTGGCCCTACTGGATCCATCCATCGGCCAGGAAACAATCTACCCACCCAC
CTCGGGATCATCGGGCCTGCACCGGCGGCGCCATGGATTCCTCTCGCGTCATTCTCATCC
CCGGCACGCCGCCGCTGCCCTACGCCTACGAGCAGCTGCCCTCCTCCTCCGCCGACGCCA
ATGGCCAGGAGGAGCAGCGGGCCGGCGGTGGCCTGAGGTGGCGCGTGTGCGCCGCCGTGC
TTGCCGCCTCGGCCGTGCTGGCGCTCGTCGTCGCCGCCGCGGTCTTCGGGGCCGGTGTGG
CGGGCCGTGACGTGGTGGCCGGCTCCGTGCCGGCCATTCCGGCAACGGAGTTCCCGAGGA
GCAGGGGCAAGGAGCACGGCGTGTCGGAGAAGACATCGGGGGCCTACTCCGCCAACGGCG
GCTTCCCGTGGAGCAACGCCATGCTGCAGTGGCAGCGCACCGGCTTCCATTTCCAGCCGG
ACAAGTACTACCAGAACGATCCCAACGGTCCGGTGTACTACGGCGGATGGTACCACTTCT
TCTACCAGTACAACCCGTCGGGGTCGGTGTGGGAGCCGCAAATAGTGTGGGGCCACGCCG
TGTCCAAGGACCTGATCCACTGGCGCCACCTCCCGCCGGCCTTGGTGCCGGACCAGTGGT
ACGACATCAAGGGCGTGCTCACCGGCTCCATCACCGTGCTCCCCGACGGCAAGGTCATCC
TCCTCTACACCGGCAACACCGAGACCTTCGCTCAGGTGACCTGCCTCGCCGAGCCGGCCG
ACCCGAGCGACCCGCTCCTCCGCGAGTGGGTGAAGCACCCGGCGAACCCCGTCGTGTTCC
CGCCGCCGGGCATCGGGATGAAGGACTTCCGCGACCCCACGACGGCGTGGTTCGACGCCT
CCGACGGCACGTGGCGCACCATCATCGGGTCCAAGAACGACACCGACCACTCGGGCATCG
TCTTCTCGTACAAGACCAAGGACTTCGTGAGCTACGAGCTGATGCCGGGGTACATGTACC
GCGGGCCCAAGGGCACCGGCGAGTACGAGTGCATCGACCTCTACGCCGTCGGGGGCGGCA
GCAAGGCCAGCGACATGTACAACTCGACGGCGGAGGACGTGCTGTACGTGCTGAAAGAGA
GCAGCGACGACGACCGGCACGACTGGTACTCGCTCGGCCGGTTCGACGCCGCCGCCAACA
AGTGGACGCCGATCGACGACGAGCTCGAGCTCGGCGTCGGGCTACGGTACGACTGGGGAA
AGTACTACGCGTCCAAGTCATTCTACGACCCCGTGAAGAAGCGGCGCGTCGTGTGGGCGT
ACGTCGGCGAGACCGACTCGGAGCGCGCCGACATCACCAAGGGCTGGGCCAACCTCCAGT
CGATTCCGAGGACGGTGGAGCTTGACGAGAAGACCCGGACGAACCTCATCCAATGGCCGG
TGGAGGAACTCGACACCCTCCGCATCAACACCACCGATCTCAGTGGCATCACTGTCGGCG
CCGGCTCCGTTGTCCCCCTCCACCTCCACCAGACCGCTCAGCTCGACATCGAGGCAACCT
TCCACATTGACGCCTCCGCCATCGAGGCCGTCAACGAGGCAGATGTCAGCTACAACTGCA
CCACCAGCAGTGGCGCCGCCACCCGCGGTGCCCTTGGACCCTTCGGTCTCCTCGTCCTCG
CCAACCGCGCCCTCACCGAACAGACGGGGGTGTACTTCTATGTGTCCAAGGGCCTCGACG
GCGCTCTTCGGACTCACTTCTGCCACGACGAGTTGCGGTCATCACATGCTAGCGATGTGG
TGAAGCGGGTGGTGGGTAGCACAGTGCCGGTGCTCGACGGCGAGGACTTTTCTGTCCGGG
TGCTCGTGGACCACTCCATTGTCCAAAGCTTCGCGATGGGTGGGAGGTTGACGGCGACGT
CGAGGGCGTACCCGACCGAGGCCATCTATGCGGCGGCGGGGGTCTACCTGTTCAACAATG
CCACCGGCACGAGCGTCACCGCTGAGAAACTCATCGTGCACGATATGGACTCGTCGTACA
ACCATATATACACAGACGACGACTTGGTAGTCGTCGGTTAGGCTGATCGCTTACAAGAAG
TTGTGGATTGATTGCTCGGTCGGTGGCTCCCTTTCTCCTAGACACATGTAATGGAGTACT
ATCGACTCTGCCTATCAGTCCATTTTTGTTCTTCCTTCTCTGGAGTTTGATTTAGTAATT
AAGATGAATTAGATGATGTTGATGACAGGGCTATGATGTTGTTGATGATGATGATTGTTC
ACTTGTAAATCAATTTGTTGGGAATCAAAATGGCATGGATGCCACCAAGTTTAAGTGAAA
AAAAAAAAAAAAAAAAATTTCTTATTTGTTTTATCTGAAAAAAAAAAAAAAAAA



Homology of Contig U35_15653 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os02g01590.16630.0protein|glycosyl hydrolases, putative, expressed
Brachypodium v1_2Bradi1g52210.16130.0
Arabidopsis v10AT1G62660.16480.0Glycosyl hydrolases family 32 protein | chr1:23199949-23203515 FORWARD LENGTH=648