- Probe CUST_31807_PI390587928
- Source Contig U35_15673
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_31807_PI390587928 | Hv_44K_v2 | TAGTACTATCACGATGATGATGAAAACTTCTGTGTTCTGTCGCTAGCTTCAGATCTTACG | 455 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_15439.1 | 778 | 2e-24 | 533 - 592 | 100 | 60 / 60 | plus | ABC03511 ABC03512 ABC05348 ABC14284 |
| JLOC1 | JLOC1_10593.1 | 758 | 8e-25 | 533 - 592 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC03511 | 516 | 3e-25 | 457 - 516 | 100 | 60 / 60 | plus | ABC03511 |
| Harvest35 | U35_15673 | 515 | 3e-25 | 456 - 515 | 100 | 60 / 60 | plus |
Contig Sequence (515 bp)
>U35_15673 515 Hv_44K_v2 CTTCCATCACCTCAGCTCACTTCTTCCACTACCACTGACCAATCATCTACTGGGATCACA CGATTCACGGACCAGCCCCCACCCACGCAGTCCACAGATCAGCTCATGGCGGCTGCAGCG AAGGCGTCGTGGATGGCGGCGATGAGCGTCGGCGCGGTGGAGGCGCTCAAGGACCAGGCC GGCCTCTGCCGCTGGAACTACGCTCTCAGGTCCGTTCACGGCGCAGCCAAGGCCAAGGCC ACCATCCGCGGTGGTGTGGTCTCGCAGGGCACGAAGCGGCTTCCGGCCTCTGCGGCGGCC GTGGCCGAGAGGCGGCGAGCGGAGAAGCCGAGGAGGGCCTGCGGACCGTCATGTACCTCA GCTGCTGGGGTACCAACTAGGCAAGGCCGGCGGTTCCGCTTGCTTCACGTACGGCTTGCT ACTTGCCTCGCTGCGGGCTGCGTCTGGGTTGTAAATAGTACTATCACGATGATGATGAAA ACTTCTGTGTTCTGTCGCTAGCTTCAGATCTTACG
Homology of Contig U35_15673 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |