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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_30749_PI390587928Hv_44K_v2TCATTTTTCTAGGTCAATCAGTCCAGCTAAATGTTAATTTTCCTTAGGCAGGGAAAAGAT2474GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.1971.7481.5870.7200.1950.158
Raw 801.0391003.900783.507563.45152.88347.448



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_72488.318653e-211557 - 16179759 / 61plus ABC01204 ABC01206 ABC01207 ABC36777 ABC37233 ABC37920 ABC49921
MLOCMLOC_72488.419223e-211614 - 16749759 / 61plus ABC01204 ABC01206 ABC01207 ABC36777 ABC37233 ABC37920 ABC49921
JLOC1JLOC1_48210.128352e-212616 - 26769759 / 61plus
Harvest21ABC507006273e-254 - 6310060 / 60minus
Harvest21ABC0120425616e-222462 - 25229759 / 61plusABC01204
Harvest35U35_1412925373e-252475 - 253410060 / 60plus



Contig Sequence (2537 bp)

>U35_14129 2537 Hv_44K_v2
CTCTCAAAACCCCTCCTAACCCTAGCCGCCTCCCGCACGCTTCTCCTCCGCTCCGCTCCC
CACCTCGAGCAGCTCAGGGACGCAGCCATGGCGACGGAGACCGAGACCTTCGCCTTCCAG
GCCGAGATCAACCAGCTCCTCTCGCTCATCATCAACACCTTCTACTCCAACAAGGAGATC
TTTCTCCGCGAGCTCATCTCCAACTCCTCCGATGCCTTGGACAAGATCAGGTTCGAGAGC
CTCACGGACAAGAGCAAGCTCGATGCGCAGCCCGAGCTCTTCATCCACATCATCCCCGAC
AAGGCGACCAGCACGCTCACGATCGTCGACAGCGGCATTGGCATGACCAAGTCGGACCTC
GTCAACAACCTCGGGACCATCGCCAGGTCGGGCACCAAGGAGTTCATGGAGGCTCTTGCC
GCCGGCGCCGACGTGTCCATGATTGGGCAGTTCGGTGTTGGGTTCTACTCCGCCTACCTT
GTGGCCGAGAGGGTCGTCGTCACCACCAAGCACAACGACGACGAGCAGTACGTGTGGGAG
TCCCAGGCCGGTGGCTCCTTCACCGTCACTCGTGATACGTCTGGGGAGCAGCTCGGCAGG
GGTACCAAGATGGTCCTCTACCTCAAGGACGACCAGATGGAATACCTTGAGGAGCGCCGC
ATCAAGGATCTAGTTAAGAAGCACTCCGAGTTTATCAGCTACCCCATCTCCCTGTGGACT
GAGAAGACCACCGAGAAGGAAATTTCTGACGATGAAGACGAGGAGGAGAAGAAGGATACC
GAGGAGGGCAAGGTTGAGGATGTTGATGAGGAGAAGGAAGAGAAGGAAAAGAAGAAAAAG
AAGATCAAGGAAGTCTCTCATGAGTGGAACTTGGTCAACAAGCAGAAGCCTATCTGGATG
AGGAAGCCAGAGGAGATCAACAAGGAAGAGTATGCTGCTTTCTACAAGAGCTTGACCAAT
GACTGGGAGGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAGGGTCAGCTTGAGTTCAAG
GCTGTCCTGTTTGTTCCCAAGAGGGCCCCCTTCGACCTCTTCGACAACAAGAAGAAGGCC
AACAACATCAAGCTGTATGTGCGCCGTGTCTTCATCATGGACAACTGTGATGAGTTGATC
CCTGAGTACCTGAGCTTTGTCAAGGGCATTGTTGATTCAGAGGACCTTCCCCTGAACATC
TCCCGTGAGACTCTCCAGCAGAACAAGATCCTCAAGGTCATCCGGAAGAACCTTGTCAAG
AAGTGCATTGAGCTCTTCTTTGAGATTGCTGAGAACAAGGAGGACTACAACAAGTTCTAC
GAGGCCTTCTCCAAGAACCTCAAGCTTGGCATCCATGAGGACTCCCAGAACAGGACCAAG
ATTGCTGAGCTTCTGAGGTACCACTCCACCAAGAGTGGTGATGAGCTGACGAGCCTCAAG
GACTATGTAACCAGGATGAAGGAGGGTCAGAACGAGATCTACTACATCACTGGTGAGAGC
AAGAAGGCTGTGGAGAACTCTCCCTTCCTTGAGAAGCTGAAGAAGAAGGGCTATGAGGTC
ATCTACATGGTTGACGCCATTGATGAGTATGCCATTGGTCAGCTCAAGGAGTTTGAGGGC
AAGAAGCTTGTCTCTGCCACCAAGGAGGGTCTGAAGCTTGATGAGAGCGAGGACGAGAAG
AAGAAGCAGGAGGAACTCAAGGAGAAGTTCGAGGGGCTGTGCAAGGTCATCAAGGAGGTG
CTGGGCGACAAGGTGGAGAAGGTCATCGTCTCTGACCGTGTTGTGGACTCACCGTGCTGT
CTGGTGACTGGTGAGTATGGGTGGACCGCCAACATGGAGAGGATCATGAAGGCCCAGGCC
TTGAGGGACTCGAGCATGGCTGGCTACATGTCTAGCAAGAAGACCATGGAGATCAACCCT
GAGAACGCCATCATGGACGAGCTCCGCAAGCGTGCCGACGCCGACAAGAACGACAAGTCG
GTGAAGGACCTGGTGATGCTTCTCTTCGAGACCTCCCTGCTCACCTCGGGCTTCAGCCTT
GAGGACCCCAACACCTTCGGCACCAGGATCCACCGCATGCTCAAGCTTGGCCTGAGCATT
GATGAGGACGATGAGGCGCCTGAGAACGACACCGACATGCCGCCCCTGGAGGATGATGCC
GGTGAGAGCAAGATGGAGGAGGTCGACTAAGCGCCAAGGCTGCGCGTCGTCGTATGTCCA
TGCCCTGCACCGTCTAGTTGCTTTTATCTTAGTGTCGTCGTTGGATGGTTTTGGCACGTC
TTAGCTGTATCGGTTTTGTCTTTTGGCTGGCCAAACATTAAGCGCGGTTAGCTTATTTGT
GGTACTCGTGGAACAGTTCGGTTATTGTTGGTTCTACTATATGTTAGCTATATTTCTTCT
AAAAAAAAAAAAAAAAAAATTCATCTGCTTTTAGTATGTTTTCTCTTAAGCTTGTGAGGC
CGCCATTTCTGGGTTCATTTTTCTAGGTCAATCAGTCCAGCTAAATGTTAATTTTCCTTA
GGCAGGGAAAAGATTCA



Homology of Contig U35_14129 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os09g30412.17000.0protein|heat shock protein, putative, expressed
Brachypodium v1_2Bradi3g39620.17000.0
Arabidopsis v10AT5G56010.16990.0| Symbols: HSP81-3, Hsp81.3, AtHsp90-3, AtHsp90.3 | heat shock protein 81-3 | chr5:22681410-22683911 FORWARD LENGTH=699