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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_30509_PI390587928Hv_44K_v2TGTCATCAGATGACCAAAGGTTGCTCCGCAACTCTTCTTCCCTGCCGGCTTCTTCTCAAC365GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36280129072e-24355 - 41410060 / 60plus ABC13116
MLOCAK37257125922e-24405 - 46410060 / 60plus ABC13116
MLOCMLOC_69504.213303e-21493 - 5529758 / 60plus None
MLOCMLOC_69504.313293e-21470 - 5299758 / 60plus None
MLOCMLOC_69504.415333e-21449 - 5089758 / 60plus None
MLOCMLOC_69504.112623e-21510 - 5699758 / 60plus None
JLOC1JLOC1_46055.615402e-21441 - 5009758 / 60plus
JLOC1JLOC1_46055.517862e-21441 - 5009758 / 60plus
JLOC1JLOC1_46055.411572e-21441 - 5009758 / 60plus
JLOC1JLOC1_46055.312212e-21454 - 5139758 / 60plus
JLOC1JLOC1_46055.215642e-21480 - 5399758 / 60plus
JLOC1JLOC1_46055.112322e-21480 - 5399758 / 60plus
Harvest21ABC284555853e-25366 - 42510060 / 60plus
Harvest21ABC473186476e-22431 - 4909758 / 60plus
Harvest35U35_487855463e-25198 - 25710060 / 60minus
Harvest35U35_292265853e-25366 - 42510060 / 60plus
Harvest35U35_467776476e-22431 - 4909758 / 60plus



Contig Sequence (585 bp)

>U35_29226 585 Hv_44K_v2
GAGCGCAGCCACTGGAGGAGGCCACCGCATCTCCTAGGGTTTCATTCGCCTCCCCCCACC
CACCCGCATCTCCAATCCAGCCAGGGGCATGGCCGACGCCGACGACCTGCTGGCCCGGAG
GCTCGACTCGGACGCCGCCGACGCCGACGGCACCAGCAACCTCTTCCAGGTCATGCGCGC
CGTCGAGGACGCCGAGGCAACAATCCGACACCAGCTGGAGGAGAACAGCCGCCTCAAGGA
AGAGCTGATGCGCAAGACCACAGAGCTCAACATCATCAGGTCAGAGGCCGCAAACCAAAC
TTCTTCAGGCGGCCTGGATCAGGACCGTGCCGTCGAGCCCTACGGAAACTCGGACAGGAA
TAACATGTCATCAGATGACCAAAGGTTGCTCCGCAACTCTTCTTCCCTGCCGGCTTCTTC
TCAACCCACTCTGCCTGGCCATCACAATCGGGAGTACCTGGATGGAGACCAGCCCGGTGG
CATGTCCCGAAAGCCGTCAGGGGAGCACATCGCTGCCGAGGCTGGCGTGCGATCTCACTT
CTCTACACCGTCGTCGCGTTCCCTCTCGCCGACTAGGCACCGCAA



Homology of Contig U35_29226 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None