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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_30070_PI390587928Hv_44K_v2CCTGATGCAAGAGTAAAGTTGATTCCGGCACAAGACATCACTTATGTACGACATGGAAAG546GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36174321202e-24575 - 63410060 / 60plus ABC03235 ABC25388 ABC31592
MLOCMLOC_7871.49002e-2422 - 8110060 / 60plus None
MLOCMLOC_7871.28202e-24171 - 23010060 / 60plus None
MLOCMLOC_7871.38202e-24171 - 23010060 / 60plus None
MLOCMLOC_7871.113092e-24173 - 23210060 / 60plus None
MLOCMLOC_65836.31853e-21129 - 1859856 / 57plus None
JLOC1JLOC1_5208.210288e-25807 - 86610060 / 60minus
JLOC1JLOC1_5208.111118e-25890 - 94910060 / 60minus
JLOC1JLOC1_43349.14422e-21386 - 4429856 / 57plus
Harvest21ABC280246063e-25547 - 60610060 / 60plus
Harvest35U35_289086063e-25547 - 60610060 / 60plus



Contig Sequence (606 bp)

>U35_28908 606 Hv_44K_v2
CCGTNTNCTTTCCTCCACCAGCCCATCTGTGGGTGCCGACGAGGAAGAAAAAATTGCGAT
AGTAGACGAAGCCTGGGAACGAAACACAGAAGCGTCGGAAGGGGAGGGCGAGAGGAAGGA
GCAGGGGAGGGCGAGAGGAAGGAGCAGGGGCAGACGAGCAGGCGCGAGGGGCGAGAGATG
GGGATCTGGTTCGTGCTGCTGGTGAACAAGCAGGGGAGACGCGGCTGGCGCAGTACTACG
AGCACCTCTCCCTCGACGAGCGCCGCGCCCTCGAGGGCGAGATCGTCCGCAAGTGCCTCG
CCCGCACCGACCAGCAGGAGCCCTGGCTTCGTCTTGACCCCGAATCAAGAACGGCGTTTC
TTTGGATCTGGATCAGGATGGGCTGTTGTTGGCCTCGATTTCCATGTCCGTCTCACGGGA
ACTCTGTGCCAATGCAGTGCTCTTTCGTGGAGCACCGGAACTACAAGGTCGTCTACAGGC
GCTACGCCTCCCTCTTCTTCCTCGTCGGCGTGGACAACGATGAGTAGCTTCCTCTTGCGG
ACAAAACCTGATGCAAGAGTAAAGTTGATTCCGGCACAAGACATCACTTATGTACGACAT
GGAAAG



Homology of Contig U35_28908 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None