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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_29773_PI390587928Hv_44K_v2CATCGTTGAAGAATTATTCATCTGCCAGGCATGATCTAGAGGGTGCATTGAGCATGGGAA422GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_38557.532023e-21908 - 9649856 / 57plus ABC03602 ABC12393
MLOCMLOC_38557.129043e-21910 - 9669856 / 57plus ABC03602 ABC12393
MLOCMLOC_38557.229053e-21908 - 9649856 / 57plus ABC03602 ABC12393
MLOCMLOC_38557.830583e-21902 - 9589856 / 57plus ABC03602 ABC12393
MLOCMLOC_38557.330673e-21908 - 9649856 / 57plus ABC03602 ABC12393
MLOCMLOC_38557.430573e-21908 - 9649856 / 57plus ABC03602 ABC12393
MLOCMLOC_38557.631923e-21908 - 9649856 / 57plus ABC03602 ABC12393
MLOCMLOC_38557.723393e-21903 - 9599856 / 57plus ABC12393
JLOC1JLOC1_25078.431062e-21907 - 9639856 / 57plus
JLOC1JLOC1_25078.330962e-21907 - 9639856 / 57plus
JLOC1JLOC1_25078.231092e-21907 - 9639856 / 57plus
JLOC1JLOC1_25078.130992e-21907 - 9639856 / 57plus
Harvest21ABC493564823e-25423 - 48210060 / 60plus
Harvest35U35_478544823e-25423 - 48210060 / 60plus



Contig Sequence (482 bp)

>U35_47854 482 Hv_44K_v2
CCGATATCCGGCGAGCCGTCGGCGAGGGCACGACCCGCGACCTCCCTACCCAACCTCTCT
CCTTCTCGGATTCCTCGACGGCCTTCCTCTATTCCACCAGGTCATCGGCGAGCTGACCGA
CCCGGGGCTTGCGCTGTGCCGCAAGGACAAGGGGAGGGCGGCGGAGCTCAAGGGCCGGGG
CAATGCCTGCTTCTCCAGGAGGGAGTTCGACCAAGCGCTTGGGTTCTATTCGCAGGGGCT
GCGTTACGTCCCGATCAGTTCTGATGGCACTGATGATATCTTGGTACCTGCATTATATGT
CAACCGTGCCTCCACCATGCATAAATTGGGCCTCCTGGAAGAGTGTCTGCGGGATTGCGA
CAGGGCCATCTCTATTTCACCTACTTATGCCAAGGCATGGTACAGGAGGGGAATGGTAAA
TGCATCGTTGAAGAATTATTCATCTGCCAGGCATGATCTAGAGGGTGCATTGAGCATGGG
AA



Homology of Contig U35_47854 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os10g36250.17947e-68protein|tetratricopeptide repeat, putative, expressed
Brachypodium v1_2Bradi3g30360.27911e-67
Arabidopsis v10None