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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_2901_PI390587928Hv_44K_v2ATCGGAAGAGCACTGCCATGCAGGCTAGCTTATAATCATCCATGAAAAACAACACACTCG329GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_51591.133462e-24656 - 71510060 / 60plus ABC03349 ABC03350 ABC49926
MLOCMLOC_51591.215132e-24313 - 37210060 / 60plus ABC03349 ABC03350 ABC49926
JLOC1JLOC1_32971.116868e-251276 - 133510060 / 60minus
Harvest21ABC0334912093e-251108 - 116710060 / 60minusABC03349
Harvest21ABC033479643e-25576 - 63510060 / 60minus
Harvest35U35_306214113e-25330 - 38910060 / 60plus
Harvest35U35_1513612883e-251113 - 117210060 / 60minus
Harvest35U35_151346833e-25576 - 63510060 / 60minus
Harvest35U35_151337863e-25237 - 29610060 / 60minus



Contig Sequence (411 bp)

>U35_30621 411 Hv_44K_v2
CGATCATAAGGTGTTTCACTTGCCCCGACAGATACTTTGAGAAGGTCATCCGGTTGGCTC
TTGGTGGTGTCGGTACAGACGAGCACACCCTTACTAGGGTGATAACCACTCGTGCCGAGG
TGGACCTGAAGGTGATAAAGGAGGCGTACCANAAGAGGAACAGCGTCCCCCTGGAGAAGG
CTGTTTCCAAGGACACAACCAGAGACTATGAAGATATGATGCTTGCACTTCTGGGAGCAG
AGTACTGAGGTCATATGTTTGATCTACCTTATGTTTGATGGAGGAATAAGAGATTAAGAG
CGTATAAAAATGACGAAATGATATAATTTATCGGAAGAGCACTGCCATGCAGGCTAGCTT
ATAATCATCCATGAAAAACAACACACTCGCCAGACTAGTTCTAGATCGCGA



Homology of Contig U35_30621 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None