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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_27264_PI390587928Hv_44K_v2AAGAAGATCAAGAGGAACTTTGGCAGGAAGATCAAGTATGCTTGCAGGAAGGCTCTAGCA321GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK250075.114832e-241004 - 106310060 / 60plus ABC06164 ABC06165
MLOCMLOC_37420.210532e-24623 - 68210060 / 60plus ABC06164 ABC06165
MLOCMLOC_37420.38602e-24421 - 48010060 / 60plus ABC06164 ABC06165
MLOCMLOC_37420.111362e-24711 - 77010060 / 60plus ABC06164 ABC06165
JLOC1JLOC1_24232.113318e-25708 - 76710060 / 60plus
Harvest21ABC437495543e-25322 - 38110060 / 60plus
Harvest21ABC061656643e-25463 - 52210060 / 60minusABC06165
Harvest21ABC0616413673e-25775 - 83410060 / 60plusABC06164
Harvest35U35_452105543e-25322 - 38110060 / 60plus
Harvest35U35_25686603e-25143 - 20210060 / 60plus
Harvest35U35_256715203e-25928 - 98710060 / 60plus



Contig Sequence (554 bp)

>U35_45210 554 Hv_44K_v2
GAGACCAAGATGTTCGCCGACGCGGGGTTCAGCTTCTCCCCATCCTACTCTTCTTCTTCC
TCGCCGCCGTCCGCCTACTCGGGTTACTCCCCCACCGTCTTCTCCCACTCCTCCTTCGCC
GCCACCCCTGCATCTGCATCCAACCACGCCGCCTTCGGGCTCCGGCGAGCCTACAGCGAG
GGTGACATTCAGAACCTTGGTGCCAATAATACCCCTCGGCCTGGGATCGCAGGGAACATG
CACGCATCTGGTGAGAGGCTTGTGACCATCAGTGACCTGAAAAGTGAGGAGAGGAAGCAG
AAGCTCTCCAGGTACAGGAAGAAGAAGATCAAGAGGAACTTTGGCAGGAAGATCAAGTAT
GCTTGCAGGAAGGCTCTAGCAGACAGCCAGCCGAGGGTGCGAGGGAGGTTCGCCAAGATG
GACGATGGCGACATGCTCAAGCCGAGGAAGTAGGACGGCCATGGAAGACCGCCTGCTGCC
AAACTCATGAGGAAGACAAGGTTGTTGCAAGGAAGGAATTGAGCTACTGCTGAGCTGCCA
GTGGCTTGTCTGCG



Homology of Contig U35_45210 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi2g14220.22529e-54
Arabidopsis v10None