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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_2575_PI390587928Hv_44K_v2TAGTTCACCAGTGGAATCCATGCTTTGTTTTTGTCGCTCTCAGGTTGCATATCATGCCAA496GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_31780.13002e-2433 - 9210060 / 60minus ABC38385
MLOCMLOC_35689.12407e-23137 - 1969859 / 60plus ABC38385
MLOCMLOC_32187.13167e-23190 - 2499859 / 60plus ABC02849 ABC38385
MLOCMLOC_9067.12857e-2331 - 909859 / 60plus ABC38385
MLOCMLOC_35586.14273e-2299 - 1579858 / 59minus ABC38385
MLOCMLOC_30431.13523e-22188 - 2479758 / 60plus ABC38385
MLOCAK37286221783e-212034 - 20939758 / 60plus ABC02848 ABC06491 ABC38385
MLOCMLOC_52480.13313e-2126 - 859758 / 60minus ABC38385
MLOCMLOC_27242.26993e-2160 - 1199758 / 60minus ABC38385
MLOCMLOC_27242.17443e-2160 - 1199758 / 60minus ABC38385
MLOCMLOC_27242.37223e-2160 - 1199758 / 60minus ABC38385
MLOCMLOC_27242.45673e-2160 - 1199758 / 60minus ABC38385
MLOCMLOC_27242.55533e-2159 - 1189758 / 60minus ABC38385
JLOC1JLOC1_20836.14658e-25198 - 25710060 / 60minus
JLOC1JLOC1_21038.14364e-23192 - 2519859 / 60plus
JLOC1JLOC1_22952.14251e-2298 - 1569858 / 59minus
JLOC1JLOC1_20131.13491e-22187 - 2469758 / 60plus
JLOC1JLOC1_18414.46282e-21423 - 4829758 / 60plus
JLOC1JLOC1_18414.36012e-21396 - 4559758 / 60plus
JLOC1JLOC1_18414.25142e-21309 - 3689758 / 60plus
JLOC1JLOC1_18414.13762e-21171 - 2309758 / 60plus
Harvest21ABC028455563e-25497 - 55610060 / 60plus
Harvest21ABC500967401e-23217 - 2769859 / 60minus
Harvest21ABC494366811e-23160 - 2199859 / 60minus
Harvest21ABC383854381e-23187 - 2469859 / 60minusABC38385
Harvest21ABC503823966e-22196 - 2569759 / 61minus
Harvest21ABC384023486e-22118 - 1779758 / 60minus
Harvest35U35_151055563e-25497 - 55610060 / 60plus
Harvest35U35_483817401e-23217 - 2769859 / 60minus
Harvest35U35_355616841e-23238 - 2979859 / 60minus
Harvest35U35_151167051e-23463 - 5229859 / 60plus
Harvest35U35_411387015e-23192 - 2509858 / 59minus
Harvest35U35_426253486e-22118 - 1779758 / 60minus



Contig Sequence (556 bp)

>U35_15105 556 Hv_44K_v2
TCCACCACGACCGGACCGAGCAGGTGGTCAAGCGGCGCGCCCAGATAGCCGTCCTTGTGG
AGCTGCGCCCAGATCGGCCATGGCGCGACCGAGCAGTTGAGGAGGGAGGGAGAGTAGGAT
TGTAGGAGTGCTCCAGCTGCTCCTATGCCCCAACCACGGAGTCGATTCCACCTCGGCCAC
AACAATAGCACCGGCAGCCATATGCTTCTTATCTCCCTCCCCTCGCCCCTGTTTGTTTAG
GTCTGGCAGCTCCCTTCCCTCACTGCCTGATGTGCGAGGAAGACTGAATCTTTCCTCCTT
GAAGGTCGGTTTCCCGCTACTCCAACCCTAGTGCTTGCCTATCGGACGCCATGGAAGGTT
GTCATGGGCTCCACATGCGTCCTATTGTTGGCCCTTGATGCGGCGCCTCGGCCTCCCATA
GAGGACCGAAAGCTTGCGGTAGAAGGAGCAAAAGCATCTCCGAGCCCTTTGGCCCTTCCT
GACGAGTTGCATCTCATAGTTCACCAGTGGAATCCATGCTTTGTTTTTGTCGCTCTCAGG
TTGCATATCATGCCAA



Homology of Contig U35_15105 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None