- Probe CUST_25537_PI390587928
- Source Contig U35_29283
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_25537_PI390587928 | Hv_44K_v2 | AAGACTCATTTTGAGCAGCTTTTCAAGGAAACAGGCACCTTCAAGAAAAACTTCCCCACA | 222 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_11761.7 | 4658 | 2e-24 | 4025 - 4084 | 100 | 60 / 60 | plus | ABC09386 |
| MLOC | MLOC_11761.4 | 2768 | 2e-24 | 2559 - 2618 | 100 | 60 / 60 | plus | ABC09386 |
| MLOC | MLOC_11761.5 | 2426 | 2e-24 | 2217 - 2276 | 100 | 60 / 60 | plus | ABC09386 |
| MLOC | MLOC_11761.6 | 2629 | 2e-24 | 2420 - 2479 | 100 | 60 / 60 | plus | ABC09386 |
| MLOC | MLOC_11761.2 | 3151 | 2e-24 | 2448 - 2507 | 100 | 60 / 60 | plus | ABC09386 |
| MLOC | MLOC_11761.3 | 3870 | 2e-24 | 3167 - 3226 | 100 | 60 / 60 | plus | ABC09386 |
| JLOC1 | JLOC1_7829.9 | 1015 | 8e-25 | 292 - 351 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_7829.8 | 3261 | 8e-25 | 2538 - 2597 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_7829.7 | 2607 | 8e-25 | 1884 - 1943 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_7829.6 | 3263 | 8e-25 | 2540 - 2599 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_7829.5 | 3318 | 8e-25 | 2595 - 2654 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_7829.4 | 3283 | 8e-25 | 2560 - 2619 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_7829.3 | 3160 | 8e-25 | 2437 - 2496 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_7829.2 | 3274 | 8e-25 | 2551 - 2610 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC28524 | 282 | 3e-25 | 223 - 282 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_29283 | 282 | 3e-25 | 223 - 282 | 100 | 60 / 60 | plus |
Contig Sequence (282 bp)
>U35_29283 282 Hv_44K_v2 GTCGCAGATCGAGAGCCGAAGACAGGTTTCACCACCAAGAATATCAAGATGACATTCTAT GGTACACAGGACAAGTGCAAGGCTTGTAACAAGACCGTTCATTTCATTGACCTCCTCACT GCCGATAGCGTTCCCTACCACAAGTATTGCTTCAAATGCAGCCATTGCAAAAGCACTCTT TCAATGTGCAGCTACTCCTCCATGGATGGAGTTCTTTTCTGCAAGACTCATTTTGAGCAG CTTTTCAAGGAAACAGGCACCTTCAAGAAAAACTTCCCCACA
Homology of Contig U35_29283 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |