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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_2498_PI390587928Hv_44K_v2CAATAAAATATATCGTGCGTGCAATTTTACTATCATTTTCTTCTTGCAGGCGACAATGGA691GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.3981.0251.1510.9200.2780.360
Raw 46.77753.76953.38672.3806.8019.847



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC438666193e-25287 - 34610060 / 60minus
Harvest21ABC1212716613e-251401 - 146010060 / 60plusABC12127
Harvest35U35_1429610373e-25692 - 75110060 / 60plus



Contig Sequence (1037 bp)

>U35_14296 1037 Hv_44K_v2
GCACGAGGCCAAGGATTTACCCCTCTCTCTTAATCCAGTGTAATATCCATTAATATGATT
TACCAATCTGATTCTTCATGTTCTCATGTATGCATGCATGGAAGTTTGGCCCCGAACTAG
ATGCGATGTTGGGAGAACTAGTCTGATGCACGGAAACCATTGATGTTGCACCGCTGCTAA
CGAAGCCACCACACCGACTTGCCAAGAATACGAGGTCTCCACCACCCGGTCCAAATTCTG
TTGATCCTACGTTCTCGGTTGAATTGGTCATGTTAGACTTGATGGATTGACTCACTTCAG
CTATCTTTTGAGAATCCACAGGTATATACCATGTACTACTGAGGGTATATATTACTTTCC
TATGAATGAGTATATGAAGTACATACCACGTCACGTGGGCGGACGTTTATACCTTTTTTT
GTAGCACATAGAGCATATACCTCAATTTTGCAAAAGGCACTCAGAAGTAAAAGTTGTATC
TTCATTCAGAACGAGAGTATGCTCAACTGAGGAGTACATTCTATATATTGCTTGAACCAT
GTATAGTACTGTAAAACAAACAGGCAAGTAGTATTCGATTGTCATCACACCTCTTTACAA
ACAAGCAAGGGAATCTATACACGTTTTGATTTAATAAAATACAAATCCTTATACTTTTCC
GTTACCCTGATTGCTTTCTACGGATAGCTTTCAATAAAATATATCGTGCGTGCAATTTTA
CTATCATTTTCTTCTTGCAGGCGACAATGGAAAGAGTATATTGTGCAGAGGAAGATGATG
AGAAGAAACTTGTGGTTCTCATCCAATCTTTGTGGAACTCTCTTTATGTGCGATTGTGTA
CTTGTTGGGTCCTTTTTCTGCGCACTTGCACTTGCAGAAGTATTCTGTTGTGCACATGTA
AAATTATTTTGATTTGTCCTTGTTAGGCGTTGAACCTTAATGTGTAGAGTCGGTGGATGA
TGTATTGTATTTGATGTGATATGCTATTGAAATGAAATATACGTTTTATTTGCATTTTTT
AAAAAAAAAAAAAAAAA



Homology of Contig U35_14296 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None