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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_24780_PI390587928Hv_44K_v2AAGAGATTTTGTTCTCGGTGATTGGGCATAGTGATTTTGATGCATCGCCTGATCTCATTC535GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36807315352e-241145 - 120410060 / 60plus ABC15629
MLOCAK35579731887e-232860 - 29199859 / 60plus None
MLOCAK35505013643e-22663 - 7229859 / 60plus None
MLOCAK35733326373e-22593 - 6529859 / 60plus ABC47068
JLOC1JLOC1_53500.11858e-2558 - 11710060 / 60plus
JLOC1JLOC1_3549.11778e-2539 - 9810060 / 60plus
JLOC1JLOC1_47963.224171e-22103 - 1629859 / 60plus
JLOC1JLOC1_47963.111001e-22104 - 1639859 / 60plus
Harvest21ABC513895983e-25536 - 59510060 / 60plus
Harvest21ABC328185254e-24468 - 52510058 / 58plus
Harvest21ABC343405045e-2337 - 969859 / 60plus
Harvest35U35_495815983e-25536 - 59510060 / 60plus
Harvest35U35_371525254e-24468 - 52510058 / 58plus
Harvest35U35_136145595e-2337 - 969859 / 60plus



Contig Sequence (598 bp)

>U35_49581 598 Hv_44K_v2
GCCCACAATGACGCCGCCTTCACCGACAACGACTTCGCCAGCATCTCCCGCATCGGCGGC
AGCAAGAAGGCCTCCTAGGCATGGAAGACCGGCCGCTTCGGAACTGCATCGAAGATTGCA
GTGACTATATGAATGACATTCTTGCTCAGATATGTTGCTCTGAACATACTTATGACGGCA
TTATAGTAGATACACAAGCAGTACAGAGGCACAGGGTGTCAATATTGGAGTGTGTAAAGG
ATGCCGATGCCCCCATTCGCAAAAGGGCCCTAGAACTTGTTTATTTGTTGGTCAATGATA
CTAATGTAAAGCTACTGACCAAAAAGCTTGTCGACTACTTGAAAGTAGCTAATCCAGACT
TCAAAGAAGATCTCAGAGCCAAGATATGCTCTATGGCTGAAAAGTTTTCTCAAGAAAAGT
TATGGTATCTTGATCAGATGTTCAAGGTTTTATCCCTGAGTTGGCATATGCTGAAAGAAA
CACTTTGAGAAGAAGNACAATTATACTCTGGTTACTAACACTGACATTTCGTTGGAAGAG
ATTTTGTTCTCGGTGATTGGGCATAGTGATTTTGATGCATCGCCTGATCTCATTCTCA



Homology of Contig U35_49581 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None