- Probe CUST_24089_PI390587928
- Source Contig U35_41674
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_24089_PI390587928 | Hv_44K_v2 | TCGTCGGTGGAAAGTCGGGAAATGACAGTGCAGGTGCAAGTTGCGTTTGATTCTAAAAAA | 11 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK365482 | 3977 | 3e-22 | 869 - 924 | 100 | 56 / 56 | plus | ABC06446 ABC13970 ABC21005 ABC36750 |
| MLOC | MLOC_74164.1 | 1130 | 3e-22 | 19 - 74 | 100 | 56 / 56 | minus | ABC36750 |
| JLOC1 | JLOC1_49412.1 | 998 | 1e-22 | 926 - 981 | 100 | 56 / 56 | plus | |
| Harvest21 | ABC36750 | 234 | 3e-25 | 12 - 71 | 100 | 60 / 60 | minus | ABC36750 |
| Harvest35 | U35_41674 | 234 | 3e-25 | 12 - 71 | 100 | 60 / 60 | minus |
Contig Sequence (234 bp)
>U35_41674 234 Hv_44K_v2 TTTTTTTTTTTTTTTTTAGAATCAAACGCAACTTGCACCTGCACTGTCATTTCCCGACTT TCCACCGACGACTCTTCCGGAAAAAACACGACAAGCAAACATTTTTTTTTTTTGGAGGGG AACAGAAGTTGAAAGAAGATATGCAATTTCACTGAGCAACCAGTCGATCTGTCACGGAAA GGGTGCGTGCTGCTTCATGTCCGTGGGCGTGACGTCCACGGCGAACCCCTTGCC
Homology of Contig U35_41674 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |