Contig Sequence (2163 bp)
>U35_15560 2163 Hv_44K_v2
TGATCCCGGTATATGAAATTGAGCCTCTTGAGAAAATTACTGATGCATACCTTGACCAAT
ACTTGTGGTATGAAGGGGACAAACGCCACCTCTTCCCAAATTGGGTAAAGCCTGCTGATT
CAGAACCACCTCCTCTACTTGTTTACAAGTGGTGCCAAGGTATAAATAATTTGCAGGACA
TATGGGACACTAGCGATGGGCAGTGTGTTGTGATGCTGCAGACAAAATTTGAGAAGTTCT
TTGAAAAAATTGATCTGACTCTGTTGAACAGGCTTCTACGGTTGGTCTTGGACCATAACA
TTGCTGATTATGTCACTGCAAAGAATAATGTTGTGCTGTCTTACAAGGATATGAGTCACA
CAAATTCTTATGGGCTTATTCGGGGTCTTCAGTTTGCATCTTTTATTGTGCAGTACTATG
GGCTGGTGCTGGATCTCCTACTTCTTGGTTTAACACGAGCTAGTGAGATTGCAGGGCCGC
CTCAGATGCCAAATGAGTTCCTTACATATACTGACACTAAAGTTGAGACAAGGCATCCCA
TCAGGCTGTATTCTCGATATATCGATAAGGTGCATATAATGTTCCGTTTCACTCATGAAG
AGGCAAGGGATTTGATTCAGCGTTACTTGACAGAGCATCCTGATCCTAATAATGAGAACA
TGGTTGGTTACAACAACAAGAAATGTTGGCCTAGAGATGCAAGAATGAGGCTCATGAAGC
ATGATGTTAATCTGGGAAGAAGTGTATTTTGGGATATGAAGAACCGCCTGCCAAGGAGTA
TTACTACATTAGAATGGGAGAATGGCTTTGTCTCTGTATACAGCAAGGATAACCCAAACC
TGCTCTTTAGCATGTCTGGGTTTGAGGTCCGTATACTGCCGAAGATACGTATGACTCAGG
AGGCATTCAGCAACACAAAAGATGGAGTATGGAACTTGCAGAATGAGCAGACAAAAGAAA
GGACAGCTATTGCATTTTTGAGGGTTGATGATGAACACATGAAGGTGTTTGAGAACCGTG
TTAGGCAAATCCTTATGTCATCAGGGTCAACGACATTTACCAAGATAGTCAACAAGTGGA
ACACTGCTCTCATTGGCCTCATGACATATTTCCGTGAAGCAACTGTTCATACACAGGAAC
TACTGGATCTGCTTGTAAAATGTGAAAACAAGATCCAGACTCGCATAAAGATTGGCCTGA
ACTCAAAGATGCCTAGTAGGTTTCCACCAGTTATCTTCTATACACCCAAGGAAATTGGAG
GCTTGGGTATGTTGTCAATGGGTCACATTTTGATACCACAGAGTGATCTTAGGTACAGCA
AACAGACAGATGTTGGTGTGACACATTTTAGAAGTGGTATGAGTCATGAAGAGGATCAGC
TTATCCCCAACTTGTATCGCTACATCCAACCATGGGAGAGCGAGTTTATTGATTCTCAGC
GTGTTTGGGCTGAGTATGCTTTGAAGAGGCAGGAAGCACAATCGCAGAATAGGCGCTTAA
CACTTGAAGATCTGGAAGATTCATGGGATAGAGGCATACCCCGTATCAACACTTTATTCC
AAAAAGACCGCCACACTTTGGCCTACGACAAAGGGTGGAGGGTGCGGACAGACTTTAAGC
AGTATCAAGTGCTGAAACAGAACCCATTCTGGTGGACACATCAGCGGCATGATGGGAAGT
TATGGAACCTGAATAACTACAGAACTGATGTCATCCAAGCACTTGGTGGTGTGGAAGGTA
TCCTGGAACATACCTTATTTAAAGGGACATATTTCCCCACTTGGGAGGGTTTGTTTTGGG
AGAAGGCTTCAGGTTTCGAGGAATCAATGAAGTACAAAAAGCTGACAAATGCACAGCGTT
CTGGGCTTAATCAAATCCCCAACAGAAGATTTACCCTCTGGTGGTCGCCAACCATTAATC
GTGCAAACGTATATGTTGGTTTCCAGGTTCAGCTAGATCTGACTGGGATATTCATGCATG
GTAAAATTCCAACCCTGAAGATCTCTCTGATTCAGATTTTCCGTGCACATCTTTGGCAGA
AGGTCCATGAAAGTGTTGTTATGGATCTTTGCCAAGTTCTGGATCAGGAGTTGGATGCAC
TGGAGATTGAGACAGTACAGAAGGAGACAATACATTCCAGGAAGAGTTACAAGATGAACA
GTT
Homology of Contig U35_15560 to Model Species (E-value threshold 1e-50)
Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
---|
Rice v7 | LOC_Os05g07050.1 | 2351 | 0.0 | protein|pre-mRNA-processing-splicing factor 8, putative, expressed |
Brachypodium v1_2 | Bradi1g48264.1 | 2351 | 0.0 | |
Arabidopsis v10 | AT1G80070.1 | 2359 | 0.0 | | Symbols: SUS2, EMB33, EMB177, EMB14 | Pre-mRNA-processing-splicing factor | chr1:30118052-30127574 FORWARD LENGTH=2359 |