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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_22427_PI390587928Hv_44K_v2TCTTTTGTTGCGTCATATCAAGTGAGGTTGCCTTGTAATATGAATGACAGGCTGCGCCAT622GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_22184.161942e-243042 - 310110060 / 60plus ABC12425 ABC15227 ABC33324 ABC38132
MLOCMLOC_22183.325832e-242434 - 249310060 / 60plus ABC12425 ABC38132
MLOCMLOC_22183.120262e-241837 - 189610060 / 60plus ABC12425 ABC38132
JLOC1JLOC1_15379.343588e-252975 - 303410060 / 60minus
JLOC1JLOC1_15379.238718e-252488 - 254710060 / 60minus
JLOC1JLOC1_15379.138508e-252467 - 252610060 / 60minus
JLOC1JLOC1_15378.218288e-251755 - 181410060 / 60plus
JLOC1JLOC1_15378.19798e-25906 - 96510060 / 60plus
Harvest21ABC287926923e-25623 - 68210060 / 60plus
Harvest35U35_294906923e-25623 - 68210060 / 60plus



Contig Sequence (692 bp)

>U35_29490 692 Hv_44K_v2
GAAATGTGCGGCTGCGTCGGGCAATGGGCGTCAGGGACCTCGCGCCAGCCAATACCTGTT
TGATGATGATGAGCCGCTGTGGATTGCGGTGGTAAGAGAATTCGCTGTGAGTGTGAGGAA
CTTGGTGGTCTTCTTGGCTGAGCAGCCAAGGCAACTGAAGCACCTCGAATGGCCGGCATT
CCGGAATACGTTGAGGACGGCAGCACTTACTCTCATACTTGTTGTTGTGTTCATTGTTGC
CTTGTCTTCCGTTGACGCTGCCCTTTCATACATTTTGTCCTGGCTACTTCGGAAATCTGC
ATAGTTTACTGTGCACAGGCACCGATATAAAATGTTTGGCTACAGGCAAGCAACTGTCTG
GCAATTATCAGTGTCATGGATCTGAATTTGGACTTTCTGTGTCGTGGATATGAAACTACC
TAACCATTTCCTCTATAGAGTTCCATAGTGGATGCAGATCACTTGGAGAAATGAGGAGAC
AAAGATGGAGAAGGAGACTGAGTTATGCCAGAGACGAAGCGAAGATGGAGAAGGAGATCA
AGTTGTGCCTGAGACGAAGCGATCAGGTCCTCACCTGAGCAAGCAAATGTCATTTATCTT
CCTCCAGGTTATCTCTCATGTATCTTTTGTTGCGTCATATCAAGTGAGGTTGCCTTGTAA
TATGAATGACAGGCTGCGCCATGCAGTTCATG



Homology of Contig U35_29490 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None