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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_22106_PI390587928Hv_44K_v2AGTGTGGCGGCGGCTATATTAAGCTAATGTCTGGTTATGTCAACCTGAAGAAATATAGCG561GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_56781.12787e-2389 - 1489859 / 60minus ABC02747 ABC34622
MLOCMLOC_32109.12643e-21160 - 2199758 / 60plus ABC02747 ABC34622
MLOCMLOC_32109.22863e-21129 - 1889758 / 60plus ABC02747 ABC34622
MLOCMLOC_32109.32903e-21187 - 2469758 / 60plus ABC02747 ABC34622
Harvest21ABC346226013e-25275 - 33410060 / 60minusABC34622
Harvest21ABC027436933e-25634 - 69310060 / 60plus
Harvest21ABC027444571e-23370 - 4299859 / 60plus
Harvest35U35_387206013e-25275 - 33410060 / 60minus
Harvest35U35_387196213e-25562 - 62110060 / 60plus



Contig Sequence (621 bp)

>U35_38719 621 Hv_44K_v2
GCAGACGCCTCGCCCCCGCCTCTCACGCCCGTCGCCGGTCCCGGCACTGCCCCGCCTCGC
CGCCGCACCGGATCTCGCCGCCGTCGCCGTCGCCGTCGCCATGGACATGGCAGCGATGAA
CGACCCGGAGAGGCTCTTCTTCTTCTACCTCGCCTGCAAGACCGCCAAGGCCACCTACGA
CGAGAACCCGCTCGACGCCGACAACCTGACGCGATGGGGCGGCGCGCTGCTGGAGTTGTC
GCAGATGCATAACGGCCCGGAGAGCCTGAAGTGCCTCGAAGACAGTTGGCGATGGAAAGC
CCGACAGAAGCAGCAGCAGCCACCACCTACTCCTCGTCTTCGGTGAGCCACCCACCGGTG
ATGGGTAGCAGCCGCCGGCGGGGCGACCGCCAGCTCCTGCACCGCCTCCTCACGCTCTCC
TCGCTGCTCCTGCTCGCCTCCGGGGCATTCAAACAACGATAGATGCTAGGCATTTTGCTA
TCTCAGCCAAGATACCGGAGTTCAGTAACAAGGGCCGAACATTCGTGGTCCAGTACTCCA
TAAAGTTTGAGCAGGAAATTGAGTGTGGCGGCGGCTATATTAAGCTAATGTCTGGTTATG
TCAACCTGAAGAAATATAGCG



Homology of Contig U35_38719 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None