barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_21975_PI390587928Hv_44K_v2AGCTCGTCTTGCTGGCTGGCTAGCTCGGTCGAGTTCTTGCATGCCTGCTTGGTCGGTGAG117GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36323130242e-24126 - 18510060 / 60plus ABC14590 ABC17101 ABC31860 ABC33337
MLOCMLOC_63471.16272e-24310 - 36910060 / 60plus None
JLOC1JLOC1_41574.16258e-25310 - 36910060 / 60plus
Harvest21ABC307734903e-25118 - 17710060 / 60plus
Harvest35U35_307344903e-25118 - 17710060 / 60plus



Contig Sequence (490 bp)

>U35_30734 490 Hv_44K_v2
TTCTCCTCCACCCCTTGTGGCCTCTCCATGACCCCTCCGACCCACCGCCACCGCCACCGC
CACCGCCACCGCGCTTGACTCTTGCTTGGACTCGCGTGTGCGTGCGTGCTTCTCTCGAGC
TCGTCTTGCTGGCTGGCTAGCTCGGTCGAGTTCTTGCATGCCTGCTTGGTCGGTGAGGGG
GTGGCACTGGTGGTGGTGAGCGAGTGGCCATGGCGTCGTCGGAGGCCGACCGGGTGCGCC
GGCTGACTCTCGAGGGGCGCGGGGGCGTGGACAGGGACAAACCGGACTCCAAGCGGGACG
TGTTCGCGGATCTCGGCTCGCCGGTCTCGCCGCTGCGGCTGCGGGCCACGCCGTCCTCCT
CCTCCTCCTCCGCCGGCTCGGCCAAGTCGCCGGCTCTGTGCAATGCGGCGGCAACGGGCG
GGAGGGGCGGCGGTGCTCGGAGTGTGAGCCACTCGGGCGAGCTGGCGGCGGAGAGCGGCA
GCAACCCGCC



Homology of Contig U35_30734 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None