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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_21940_PI390587928Hv_44K_v2AAATTTTGGAGCAGCGTCCGCGGACGGCGACGCCGTGTTCGCAGAAATGGGCAGGAAAGC1GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_12275.611643e-21980 - 10399758 / 60minus ABC11307
MLOCMLOC_12275.114223e-211213 - 12729758 / 60minus ABC16950
MLOCMLOC_12275.514393e-211171 - 12309758 / 60minus ABC16950
MLOCMLOC_12275.215343e-211325 - 13849758 / 60minus ABC11307 ABC16950
MLOCMLOC_12275.79983e-21837 - 8969758 / 60minus ABC11307
MLOCMLOC_12275.415433e-211365 - 14249758 / 60minus ABC11307 ABC16950
JLOC1JLOC1_8231.315652e-21210 - 2699758 / 60plus
JLOC1JLOC1_8231.216212e-21154 - 2139758 / 60plus
Harvest21ABC307843053e-252 - 6110060 / 60plus
Harvest35U35_307453053e-252 - 6110060 / 60plus



Contig Sequence (305 bp)

>U35_30745 305 Hv_44K_v2
CAAATTTTGGAGCAGCGTCCGCGGACGGCGACGCCGTGTTCGCAGAAATGGGCAGGAAAG
CCATCCGATACGCCGTGGTGGACGCCTTCGCGACCGAGCCGTTCAAGGGCAACCCCGCCG
CGGTGTGCCTCCTCGAGGACGACAACGCCGCGGACGAGCGGTGGATGCAGTCCGTCGCCA
CCGAGTTCAACCTCTCGGAGACCGCCTTCCTCGTGCGCGACTTCTCCCGGCCCGCCAGCG
CCGCCCCGCTCTTCCACCTCCGATGGTTCACTCCCGTCACCGAGGTCGACCTGTGTGGGC
ACGCG



Homology of Contig U35_30745 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None