barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_213_PI415269222Hv_44K_v2GCTAGGCAATTTTATTCATGAAGTTTGCACCTTTCTTAATCAAGGACCTTAATGATGCTA582GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36314535653e-22578 - 6369859 / 60plus ABC10458 ABC10459 ABC10460 ABC12425 ABC38132
Harvest21ABC209917295e-23542 - 6009859 / 60plus



Contig Sequence (1052 bp)

>TA45620_4513 1052 Hv_44K_v2
CTGGGTGCGAATCTCCCTCCGCTCCGCTCCCAACATGGCAAGAAAGACCCGCAACCCTCC
GCCGAGGGCAAGATCTCGCCGGGGCGCGCCGCCGCCGCCGCCGTCGCCGCCGCCGACGCC
GCCGCCGTCGTCGTCAACCGCAGCCCCCGCGCTGAGCCCTCCCTTCTCCCCTGTCCGGTT
TTGCGGCCGCCTTGGCGCTGCGGAGGCCGCCGCCGCCGCCGCCGACGTCGAGCACCCACA
CGTCACGCTGTGGGAGTGGTGGCCGGTGAGGCTGAAAGGGGAAGAGCGGAAGCTCGCTGT
TTCCGGCTTCACTGAAAAGAATTACCTATTCACTTCTGCACCCATAGCACAGCGTTATGA
GTCTCTCACGCTCCAAGATGAAGATGGGGTTGTGGTGCTCCTTTATGGTTCATTTAGCTT
ATTGCGAATGCGTGAGAATGGGTTTTCTATGCAGATATGTGAACAATTCATGATTGGATT
TCCGTACTGGTGGGAGACTTGGGATTCACACATGGAATCTTACCCAAACCTTTTTATCCA
CCCACAAGAGGATTCAGCTCAATTTTACCTGGAGAAATTCCAGCTAGGCAATTTTATTCA
TGAAGTTTGCACCTTTCTTAATCAAGGACCTTAATGATGCTAAAAAGTTACCAATCAATG
ATCTCGATGCATTCATAGGGGGTTCAAGATTTCAGGAACACAATTGTGGAAATGATGTTT
CAACCAAGGAAAATTCTGCTGCTTCAGATGATGCCAGACCCGCAGCTGTAGCTAATGTGG
AAATACGCTTGAACCCGAGCAGCACTTCACATGAAAGAGATCATGCGAACATTGAGGGTA
ATGTATCTCTTGCTCCTACAGAAACATATACTGGTGATGAAACTTGCAAAGAGGCAGGAA
ATCAGAATGACACTATGCATCCAGATGCAAGAGAAGATGATGCTGGTAGCCATCATGATC
TCGATGCATTCACAGGGGGTTCAAGATTTCAGGAACATAACTGTGGAAATGATGTTTCAA
CCAAGGAAAATTCTGCTGCTTCAGATGATGCT



Homology of Contig TA45620_4513 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi5g25291.27173e-70
Arabidopsis v10None