barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_21124_PI390587928Hv_44K_v2ATCATCTCCACCGGGATCAACCCCAAGGCCAAGCCATACTTCCTCTTGGACGGCTACGCC387GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35942518757e-23318 - 3779859 / 60plus ABC02160 ABC02161 ABC02162
MLOCMLOC_44602.18343e-21525 - 5849758 / 60minus ABC02159 ABC02160 ABC02161 ABC02162
JLOC1JLOC1_28914.19682e-21251 - 3109758 / 60plus
Harvest21ABC021564743e-25388 - 44710060 / 60plus
Harvest21ABC021609581e-23312 - 3719859 / 60plusABC02160
Harvest21ABC457522826e-22189 - 2489758 / 60plus
Harvest35U35_148894743e-25388 - 44710060 / 60plus
Harvest35U35_148929531e-23307 - 3669859 / 60plus



Contig Sequence (474 bp)

>U35_14889 474 Hv_44K_v2
TCTCTCCTCCTTCTCTCCCCTCCCTCACCTCCACTCGTCGCCGTCCAGTCTCCGGCGAGA
TCCCCGCCGCTCCCCCGCCGGCAGCCATGTCTTCCGTCTTCAGCGGCGACGAGACCGCCC
CCTTCTTCGGCTTCCTCGGCGCCGCGGCCGCCCTCGTCTTCTCCTGTAAGCCTCCCCTCC
TCCCCCTCCTCCCCCCCAGATCTCCCCTCCTCCGGATCTGACCGCGGCGCGTGTGATGAC
GCAGGCATGGGCGCGGCGTACGGGACGGCCAAGAGCGGGGTGGGGGTGGCGTCGATGGGG
GTGATGCGGCCGGAGCTGGTGATGAAGTCCATCGTGCCCGTCGTCATGGCCGGGGTGCTC
GGGATCTACGGCCTCATCATCGCCGTCATCATCTCCACCGGGATCAACCCCAAGGCCAAG
CCATACTTCCTCTTGGACGGCTACGCCCACCTCTCCTCCGGCCTCGCCTGCGGC



Homology of Contig U35_14889 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None