barSeed - Barley Seed Development Database

Probe ABC02161

Source Contig ABC02161

barSeed

Links

Affymetrix Source Sequence (958 bp)

>ABC02161 958
ACGAGAGGAGAGGAGAAAATAAAAGCAAACTTGAGAGACCATCCGTTCCTCACCCTACCA
ACCATCTTCCTTCCTTAGCGACGAGGCCACCCAGAGCTCCACACGAAGGAAAGCGCGACC
GGAGGAGGAGGAAGAAGAGGAGCAAGTATGTCGTCGGTGTTCAGCGGCGATGAGACGGCG
CCCTTCTTCGGCTTCCTCGGCGCCGCCGCCGCCCTCGTCTTCTCATGCATGGGGGCGGCC
TACGGGACGGCCAAGAGCGGCGTCGGGGTGGCGTCCATGGGGGTCATGCGGCCAGAGCTC
GTCATGAAGTCCATCGTGCCCGTCGTCATGGCGGGAGTGCTCGGAATCTACGGCCTCATC
ATCGCCGTCATCATCAGCACCGGGATCAATCCCAAGGCCAAGCCCTACTTCCTCTTCGAC
GGCTACGCCCATCTCTCCTCCGGGCTCGCCTGTGGCCTCGCGGGGCTCGCCGCCGGCATG
GCCATTGGCATTGTCGGTGATGCTGGAGTCAGGGCTAATGCGCAACAACCAAAGCTGTTC
GTGGGTATGATCCTCATTCTCATTTTCGCAGAAGCGCTCGCCCTTTACGGTCTCATCGTG
GGCATCATCCTCTCATCCCGTGCCGGCCAGTCCCGCGCGGATTAGGCGCCTTGCTCTACC
ATTCCACAATTGCTATGCAGGCTACATTCTTGAGAAGTTGGAAGCTTTGAAAAGTTCTAA
TTTTGATGTATTAAGGAGATATTTGTAGATTATTAAGGAAGGTGACACTTCCAGTACCGT
TTTCATTCTTTTTGGGTTGTGGTGGGCGTTTGCTGTTGGTGCAGAGGATTTTGGGGTAGG
CTGGATTGCTGCTCCTGGGAATATGGGTTTTAATCCTATTGGTGGTGAATAAAAACACGC
ATTGTAGCTAAATAATAAATTTATGATTATATTATGTTCAAAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK249261.1	1000	0.0	29 - 969	99	938 / 941	CUST_21125_PI390587928	ABC02159 ABC02160 ABC02161
MLOC_19684.1	581	0.0	126 - 581	99	455 / 456	None	ABC02159 ABC02160 ABC02161
MLOC_51917.1	1245	0.0	658 - 1088	100	431 / 431	CUST_21125_PI390587928	ABC02161
AK361887	3776	0.0	1051 - 1559	89	456 / 510	CUST_8476_PI390587928	ABC02159 ABC02161 ABC02490 ABC02491 ABC02496 ABC02634 ABC29477 ABC31795 ABC50608
MLOC_59475.1	1091	0.0	205 - 713	89	456 / 510	None	ABC02159 ABC02161 ABC31795
MLOC_44602.1	834	1e-171	309 - 806	89	441 / 498	CUST_21124_PI390587928	ABC02159 ABC02160 ABC02161 ABC02162
AK359425	1875	3e-133	96 - 461	90	330 / 366	CUST_37558_PI390587928 CUST_21124_PI390587928	ABC02160 ABC02161 ABC02162