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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_19430_PI390587928Hv_44K_v2CTGTATATGTATCTGCAGCGTATCGCTAAATAAAGCCTAGATGTGTTCATTGTCAAAAAA424GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_69899.419859e-221929 - 198310055 / 55plus ABC18746 ABC18837 ABC47164
MLOCMLOC_69899.221329e-222076 - 213010055 / 55plus ABC18746 ABC18837 ABC47164
JLOC1JLOC1_46346.121665e-222086 - 214010055 / 55plus
Harvest21ABC188374983e-2512 - 7110060 / 60minusABC18837
Harvest35U35_221674953e-25425 - 48410060 / 60plus



Contig Sequence (495 bp)

>U35_22167 495 Hv_44K_v2
GAGCCGACAACCCAGGTGTATGGTTCATGCATTGCCACTTGGAGGTGCACATGAGCTGGG
GGCTGAAGATGGCGTGGCTGGTGCTGGACGGTAACCTTCCGAACCAGAAGCTCCCGCCGC
CGCCGGCAGATCTTCCGAAATGCTAGACGTGAAGATCAAGATCGATCGTCGGTGAAGAAG
ATTGCCCGCTTCGTTGCTTCGCTCCCGCCTCACATTGTTATCCGCAATCTTTTGCTCCCG
CGTGTCCAGCGAGTTCGTCTCCAATATGGTGATGTGTTTTTTTTCTTACGCTAATTGATT
TTTCAGGCGATTCGCCGTGCTTGTTGTATGCACTTTATTCATTGCCAGAGTGTTGTCAGG
ACTTTTCTTAAGTGGCTGGGCTTCTTTGTAACTTGTAACTGAAAGGTCTTACATTTTTTT
CTATCTGTATATGTATCTGCAGCGTATCGCTAAATAAAGCCTAGATGTGTTCATTGTCAA
AAAAAAAAAAAAAAA



Homology of Contig U35_22167 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None