- Probe CUST_19074_PI390587928
- Source Contig U35_46006
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_19074_PI390587928 | Hv_44K_v2 | ATGATGAGCCCAAGAAAACAGCAGCAGCTATGGCAGATAAACTTGCATCTTTGGCATCTC | 133 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK376476 | 2389 | 2e-24 | 1302 - 1361 | 100 | 60 / 60 | plus | ABC20642 ABC40816 |
| MLOC | MLOC_55275.1 | 1680 | 2e-24 | 905 - 964 | 100 | 60 / 60 | minus | ABC20642 ABC40816 |
| JLOC1 | JLOC1_35638.1 | 1678 | 8e-25 | 549 - 608 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC45512 | 240 | 3e-25 | 134 - 193 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_46006 | 240 | 3e-25 | 134 - 193 | 100 | 60 / 60 | plus |
Contig Sequence (240 bp)
>U35_46006 240 Hv_44K_v2 AGTACACTCATGACCACAATTCCGTCAGAGCAGACTGCTGCGATGATGCAGAATGCAGCA ATAAGCCCAATAACTTCCCAGTTTCAACCACCACATACAGCAATCCCGCTTTCAGGCACA GCCAGTGCTGCAGATGATGAGCCCAAGAAAACAGCAGCAGCTATGGCAGATAAACTTGCA TCTTTGGCATCTCCGGAGCAGGTGCTCTCCTCCGTTTTGGCCTCCCTTGTTGCTGAACAA
Homology of Contig U35_46006 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |