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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_18712_PI390587928Hv_44K_v2TTGGAAAACTTGTTGCCACGCGGATGCCATGAAGGCATTTGTTTTAGTGCCAAATATTAC634GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36169820072e-241839 - 189810060 / 60plus ABC26165 ABC40364 ABC40947
Harvest35U35_136158673e-25635 - 69410060 / 60plus



Contig Sequence (867 bp)

>U35_13615 867 Hv_44K_v2
CCTAAACACTAGCACTCAAGTGAGGAGGGTACCCGGCGACAACACCTTCCAGGTACCAGA
GGGCATCCTCCAGGGGGCCACAACATTAGACACAAACTACTCCTTTTTCGAGATCAACGT
AGCGGCGGGTCCCAACCTGGACGCCAAGAACCTACAGCTTCTCCCGATCTTCCACTTTGC
CGAGATCAACATCAGCAACCAGAACAGGAGGTTCGACATCTACAGCGACAACGACTTGCT
ATTTCCAGACTTCTCGCCGTCACGATTCCAGGCGGACAGCATGCACCAAAACGGGCGGTT
GTTGCACAACCCTGCTGGGATCTTCCTCCTGAACAAGACACGCAGCCCAAGGCTCCCGCC
GCTCATCAATGCGTTTGAGGTGTACTCGCCAGTGCGGATGGATAACCTCACCACTGACGC
CGAGGATGCCCATTATATGAACGAAGTCAAGAAGCACTACAATTTGGCACGAATAAACTG
GAATGGAGATCCATGCTCCCCAAGAGAGTATTCCTGGGAAGGTTTGACTTGCGACTACTC
CAAGAGGAACCAGAATCCAAGGATTGTTGCAGTAGATTTATCTGCCAGTGGACTGAAAGG
TGGATTGGTCATAGCCTTCATGAACATGGTATCATTGGAAAACTTGTTGCCACGCGGATG
CCATGAAGGCATTTGTTTTAGTGCCAAATATTACGTACTAATGCCTGCAAAGTATCGTTG
TGTATTATATTTGCTATGGAGCTATGTATGTATGGATGCTATGGAACTATATGTATATAT
GGATGCTATGGAATTTTGGATGTATGTATGCTATGGAATTTTGATATATGGATCATGAAA
TTTGTTATGCAAAAAAAAAAAAAAAAA



Homology of Contig U35_13615 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os01g59580.19165e-72protein|retrotransposon protein, putative, unclassified, expressed
Brachypodium v1_2Bradi2g52970.27207e-114
Arabidopsis v10None