barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_18192_PI390587928Hv_44K_v2GTTCAGGAGGAAGGCCTTCTTGCACTGGTACACAGGCGAAGGCATGGACGAGATGGAGTT418GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_60495.113547e-23635 - 6949859 / 60minus ABC01503 ABC01506 ABC01507 ABC01508 ABC01509 ABC01510 ABC01511 ABC01512 ABC01516
MLOCMLOC_60495.214457e-23424 - 4839859 / 60minus ABC01503 ABC01506 ABC01507 ABC01508 ABC01509 ABC01510 ABC01511 ABC01512 ABC01516
MLOCAK37522317913e-211300 - 13599758 / 60plus ABC01503 ABC01506 ABC01507 ABC01508 ABC01509 ABC01510 ABC01511 ABC01512 ABC01516
MLOCAK36630518483e-211257 - 13169758 / 60plus ABC01503 ABC01506 ABC01507 ABC01508 ABC01509 ABC01510 ABC01511 ABC01512 ABC01516
MLOCMLOC_7744.113403e-21409 - 4689758 / 60minus ABC01503 ABC01506 ABC01507 ABC01508 ABC01509 ABC01510 ABC01511 ABC01512 ABC01516
JLOC1JLOC1_39455.116644e-23963 - 10229859 / 60plus
JLOC1JLOC1_5109.114202e-21779 - 8389758 / 60plus
Harvest21ABC445474783e-25419 - 47810060 / 60plus
Harvest21ABC0150917941e-231247 - 13069859 / 60plusABC01509
Harvest21ABC015046291e-23502 - 5619859 / 60plus
Harvest21ABC015167316e-22392 - 4519758 / 60minusABC01516
Harvest21ABC0151512536e-22410 - 4699758 / 60minus
Harvest21ABC015147876e-22407 - 4669758 / 60plus
Harvest21ABC0150518036e-22504 - 5639758 / 60minus
Harvest35U35_455334783e-25419 - 47810060 / 60plus
Harvest35U35_1433418081e-231247 - 13069859 / 60plus
Harvest35U35_1433118056e-221244 - 13039758 / 60plus



Contig Sequence (478 bp)

>U35_45533 478 Hv_44K_v2
GTCTGATACGGTCGTTGAACCATACAATGCTACCCTCTCTGTGCACCAGCTTGTTGAGAA
CGCGGATGAGTGCATGGTTCTTGACAATGAGGCTCTCTACGACATCTGCTTCCGCACTTT
GAAGCTTACCACTCCCACCTTTGGTGATCTGAACCACCTTATCTCTGCAACCATGAGTGG
TGTTACCTGCTGCCTTCGTTTCCCGGGTCAGCTCAATTCTGACCTCCGGAAGCTTGCTGT
GAACCTGATCCCATTTCCACGGCTGCACTTCTTCATGGTTGGATTTGCTCCGCTGACCTC
GCGGGGTTCACAGATGTACCGTGCTCTCACTGTGCCTGAAGATGTCGTCCACGTTCGTCG
GCAACTCCACGTCGATCCAGGAGATGTTCCGCCGCGTGAGCGAGCAGTTCACCGCCATGT
TCAGGAGGAAGGCCTTCTTGCACTGGTACACAGGCGAAGGCATGGACGAGATGGAGTT



Homology of Contig U35_45533 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os05g34170.34359e-73protein|tubulin/FtsZ domain containing protein, putative, expressed
Brachypodium v1_2Bradi2g10970.14471e-73
Arabidopsis v10AT5G23860.14495e-73| Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044528 FORWARD LENGTH=449