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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_15936_PI390587928Hv_44K_v2TGTGGCGCTGATGTGATACATATACATGCTGACATTTCTTTCTTTCTTTGTTCCTATGAA743GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_40238.222542e-242150 - 220910060 / 60plus ABC14590 ABC17101 ABC31860 ABC33337
MLOCAK36323130247e-232933 - 29929859 / 60plus ABC14590 ABC17101 ABC31860 ABC33337
JLOC1JLOC1_26294.120168e-251849 - 190810060 / 60plus
Harvest21ABC318602303e-2545 - 10410060 / 60minusABC31860
Harvest21ABC145906836e-228 - 649856 / 57minusABC14590
Harvest35U35_47798433e-25744 - 80310060 / 60plus



Contig Sequence (843 bp)

>U35_4779 843 Hv_44K_v2
GGGCGCACGGGTGAAGGAGATGATCTGCCCCAGCTTACACGTTTTACGCTATTCAGTGAG
GCACTACGCCGTCTCCAATTCTTGAGGAGGTCATACCAGTGGCACCCATACTAGTCCTTC
GATGCATAGAGTCCCCGGTCCATTGCCGACATTTTACCGACACATTTTTTCTATAGAATC
AGCCCCTCCACATCACCTCAGCAGCCTCCATTGAGCATCAACCAAATTAAATTTTGTACA
TCAAAGAGTTTGCTATCACCACCCATACTTCCTTTCACCATGCTGTTGCTAGTCCCGAGT
CCTGACCCTTCATTCGACCTACTGTTGGATCATTTAGGCTCCTCATTTCCTACCATCACC
AGTATCCATCACCGCACCAGCCTTGAGCAATTCTTTCATCTCTTGCAACTCTCTTCTCTG
CCACCTCATGCATCATTCCATACATTCTGCTCCTCCCCGTAGAATGACAGCCGCTTCTCA
GAGAAAAATAAAGCTCCTGACATATTTTTAGATGCATGCCATTGTTAGAGAGGGAGGAGG
AAGAGATAAGAAGAGACCTGCCGTGTGCCGGCTTCTTCATTACGTGTACATAAACCATAT
AGCAGAAAAAAAATGGGGGATTGGTTATTCTGCGGAGGAACGAACGGCCGCGCCGTTTTT
GGCGTCGGGCCAGTTTCCATTTGAGAAGGATGTTGATGTAATCTGGTAGGAAGGTTGTCA
TTTTCATGTCCTGTGGAGGGCCATGTGGCGCTGATGTGATACATATACATGCTGACATTT
CTTTCTTTCTTTGTTCCTATGAATAAAAATAGTCCGACATTCATTCAAAAAAAAAAAAAA
AAA



Homology of Contig U35_4779 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None