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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_15894_PI390587928Hv_44K_v2CAGCGATAGCAACTCTTGATAAGGACAAGTGATCATATGCAAAGATGGTTTTATATTTCT739GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36401333247e-231208 - 12679859 / 60plus ABC00120 ABC00610 ABC00897 ABC00945 ABC18158 ABC49781
JLOC1JLOC1_17703.28703e-24812 - 87010059 / 59plus
JLOC1JLOC1_17703.18663e-24808 - 86610059 / 59plus
Harvest21ABC526465233e-25463 - 52210060 / 60plus
Harvest35U35_216828003e-25740 - 79910060 / 60plus



Contig Sequence (800 bp)

>U35_21682 800 Hv_44K_v2
GAGAGCACGGTCCCCACACATACCAAATGATGTGCTTATTCATATCTTCAGTTTTCTGGA
CATGCGTTCTTTGGTGGCAGCTAGTCTTGTGTGCTGGCCTTGGAATTCATCTGCAAACGA
CAACAAGCTGTGGAAAACAAACTACTCCCTCTTCTTTAGCGCGTCCCATTTGAGCTCCAA
CAGCACGCCTGTATCCAGTGGTATACAAAACAGTCATGCTCTTCTTGTGCAGAATAATGT
GGATCCAGTATTTGATGATCCCAATTTGAACTGGAAAGAGGTTTTCCGCAACAAGCATGC
AGAGTGCATAAGCTGGAGTGCCTCATCAAATAGAGCAATATGTCAGCAATGCCGTTCGAT
TCTTTGGCTGAGCAATTTGACGTGTGCTGCTCCTCACCATTGTCCTAAGAAAGGAAGAGA
TGAAGTAAAACTAATGCCCATGTTACCTTATGCAGTTGCTTGTTACATATTAAATGCTCA
TGATCGACCGTCTTCATCATCTGACAGTGAAGATACAGATAGTGATTCTGAAAACAACGT
GCCCAGACGACTTTGGAATTCTCGTGTTTGAGTGAATTCGATTGTATAAATGTGTAAGCT
AGTTTTGTTGTACCGTTTATATTCTGGTGATTTCTGACACCGGCATTCACGCTGTTGTAA
TTCACCATGAAATGTTCAATGAGAACTTATAACTTCAAACACTCTGCTCCTACACCCACT
GCTGTAAACAGAACACTAGCAGCGATAGCAACTCTTGATAAGGACAAGTGATCATATGCA
AAGATGGTTTTATATTTCTA



Homology of Contig U35_21682 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os05g45040.13096e-65protein|OsFBX170 - F-box domain containing protein, expressed
Brachypodium v1_2Bradi2g19240.13192e-79
Arabidopsis v10None