barSeed - Barley Seed Development Database

Probe ABC49781

Source Contig ABC49781

barSeed

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Affymetrix Source Sequence (185 bp)

>ABC49781 185
TATCGTCCGATCGATGTGAATGCAATGCCATGGGAGTGCGTACCCGTTATTGTCCAGTAC
TGGATGCCGGATGGCCCCATGTGAATTTGCCATAAGCAATAGAACCTTTTTTTCTTCACC
ATTTTCTGGCGAGTTATTGTACTGCTATGTCATGCATAATTGATCGTCTTGGAGTGAGAN
ACATC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK364013	3324	1e-75	1425 - 1596	97	166 / 172	CUST_29743_PI390587928 CUST_9723_PI390587928 CUST_15894_PI390587928 CUST_9716_PI390587928 CUST_39300_PI390587928	ABC00120 ABC00610 ABC00897 ABC00945 ABC18158 ABC49781
AK248519.1	1360	1e-75	1104 - 1275	97	166 / 172	CUST_9723_PI390587928 CUST_9716_PI390587928 CUST_39300_PI390587928 CUST_29743_PI390587928	ABC00120 ABC00610 ABC00897 ABC00945 ABC49781
AK248545.1	1099	1e-75	836 - 1007	97	166 / 172	CUST_39300_PI390587928 CUST_9716_PI390587928 CUST_9723_PI390587928 CUST_29743_PI390587928	ABC00120 ABC00610 ABC00897 ABC00945 ABC49781
MLOC_43331.1	898	4e-61	763 - 895	98	131 / 133	CUST_9716_PI390587928 CUST_39300_PI390587928	ABC00120 ABC00610 ABC00897 ABC00945 ABC49781
MLOC_43331.2	994	1e-55	875 - 994	99	119 / 120	CUST_39300_PI390587928	ABC00120 ABC00610 ABC00897 ABC00945 ABC49781