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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_1572_PI390587928Hv_44K_v2GTAGAGCAGATTGCTTCTTGTTGTTATCTGATTGTAAACTTCATGCTGATCACATTTGTA450GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_63762.27987e-23672 - 7319859 / 60plus ABC06549 ABC42046
MLOCMLOC_63762.120317e-23149 - 2089859 / 60minus ABC00122 ABC06549 ABC42046
MLOCMLOC_63762.39247e-2322 - 819859 / 60minus ABC06549 ABC42046
MLOCMLOC_63761.18017e-2322 - 819859 / 60minus ABC06549 ABC42046
JLOC1JLOC1_41804.19214e-23736 - 7959859 / 60plus
Harvest21ABC300395253e-25451 - 51010060 / 60plus
Harvest21ABC065498501e-23707 - 7669859 / 60plusABC06549
Harvest21ABC420462786e-2261 - 1209758 / 60minusABC42046
Harvest35U35_302275253e-25451 - 51010060 / 60plus
Harvest35U35_137938501e-23707 - 7669859 / 60plus
Harvest35U35_1367413351e-231242 - 13019859 / 60plus
Harvest35U35_443862786e-2261 - 1209758 / 60minus



Contig Sequence (525 bp)

>U35_30227 525 Hv_44K_v2
CCGGAAGGGAGAAAAGAACTAGAGGGAGGGAGATCCATCCCGATCCATTCGGGGCTAGGG
TTCGGGCGGGGCGTCGCTGGCGGCCTCTCCGCACTTCTTCGACCGGATCCGCCGCCCCCA
CCTCCCCTCCATCTCTCAGCCCCCCACCTCACGGACGACCAGAGTCGCACGGCAGAGCAC
CGCCGCGCCGGGGAAGAGGAGATGATGATGGGGATGATCAACGCGAACCAGGTGGTGCAC
GAGCGGCCGGAGCGCGCCTCCCACCTCGCGCACGCGGCGCTTGACACGCTCGACGTCTTC
GATACAGTGCGGGACATCAAGGACCCGGAGCATCCATACTCGCTGGCTACTAGATCTGGA
GCTGGTAAATCACAGGACAAAGAAGTCGGAAGAAGCTGATCCTATTTGTATCTGTGTAAT
AACTTGGCGCATGTGATAGACTGTAAACTTGTAGAGCAGATTGCTTCTTGTTGTTATCTG
ATTGTAAACTTCATGCTGATCACATTTGTATATGTGTTATATGAT



Homology of Contig U35_30227 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None