- Probe CUST_15729_PI390587928
- Source Contig U35_13793
Probe Details
Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
---|---|---|---|---|
CUST_15729_PI390587928 | Hv_44K_v2 | GCATAGTTCTCGGAGTAATGAAGCCCTTTAAGTTGATCCTATTTGTATCTATGTAATATG | 635 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
---|---|---|---|---|---|---|---|---|
MLOC | AK375808 | 1890 | 2e-24 | 660 - 719 | 100 | 60 / 60 | minus | ABC00003 ABC00255 ABC06549 ABC34401 ABC42046 |
MLOC | MLOC_63762.2 | 798 | 2e-24 | 601 - 660 | 100 | 60 / 60 | plus | ABC06549 ABC42046 |
MLOC | MLOC_63762.1 | 2031 | 2e-24 | 220 - 279 | 100 | 60 / 60 | minus | ABC00122 ABC06549 ABC42046 |
MLOC | MLOC_63762.3 | 924 | 2e-24 | 93 - 152 | 100 | 60 / 60 | minus | ABC06549 ABC42046 |
MLOC | MLOC_63761.1 | 801 | 2e-24 | 93 - 152 | 100 | 60 / 60 | minus | ABC06549 ABC42046 |
JLOC1 | JLOC1_41804.1 | 921 | 8e-25 | 665 - 724 | 100 | 60 / 60 | plus | |
Harvest21 | ABC06549 | 850 | 3e-25 | 636 - 695 | 100 | 60 / 60 | plus | ABC06549 |
Harvest35 | U35_13793 | 850 | 3e-25 | 636 - 695 | 100 | 60 / 60 | plus | |
Harvest35 | U35_13674 | 1335 | 3e-25 | 1171 - 1230 | 100 | 60 / 60 | plus |
Contig Sequence (850 bp)
>U35_13793 850 Hv_44K_v2 GGCACGGGTCAACCCAACCCCTCGCTCTCCCTCCCTGTCTCGCCCAATGGAGAGAGAGAG CTAGAGCGAGAGCTCTCCTCCTCCCTTCGAGATCACGGCCGTCACCTCCCTTCTGAGGAG CTTGCCACCTCCCTCCTCCTCTCGCCCACGGCCTCCCCCACGCCCTCCTCCTCTCGCCCC TCCCCTTCCCTCACTAGAAGGGAGAGAAGAACTAGAGGGAGGGAGATCCATCCTGATCCA TTCGGGGCTAGGGTTCGGGCGGGGCGTCGCCGGTGGCCTCTCTGCCCTTCTTCGACCGGA TCCGCCACCCCCACCTCACCTCCATCTCTCAGCCCACCTCGCACGAGCGCCCGGATGGTG GTGCGCGAGCCTCACTAGGAGGGATATCCATCTGGATCGGAACTAGGTGGTGCATGAGAG GCCGGAGCGCGCCGCCCACCTCACGCACACGGCGCTCGACGCGCTCGCCACCATCTGCAA CCCGCCGGTCAATGCTCTGCACCCCATCATCATCTAGGGGCTCAACTAGAAGAACGCCTT CGGCCTTCGGCCGCGATGACATCATTGCCGCCGTGCTCACCGATGTTGGCGTTTCATGTT TCTTCGTGAGCATCAGGACAAAGAAATCGGAAGAAGCATAGTTCTCGGAGTAATGAAGCC CTTTAAGTTGATCCTATTTGTATCTATGTAATATGATTGTAAACTTGTAGAGAAGATTGC TTCTTGTTGTTATCTGATTGTAAACTTCATGCTGATCACATTTGTATATGCGTTATATGA TGTAGCAGATTATATTGCTTCTTGTTGTAATTTGAAGTATTGCGTCTGTGTTTAAAAAAA AAAAAAAAAA
Homology of Contig U35_13793 to Model Species (E-value threshold 1e-50)
Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
---|---|---|---|---|
Rice v7 | None | |||
Brachypodium v1_2 | None | |||
Arabidopsis v10 | None |