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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_15702_PI390587928Hv_44K_v2GCTTTGTATTTTCCACTTTATGGCACCTTCTGGGTATTGTATCACTTGATGCCGTACGGT425GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.5291.3761.3951.0260.3470.332
Raw 30325.93341476.66737196.00042590.1005168.8235385.617



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_60992.118623e-211572 - 16319758 / 60plus ABC01503 ABC01506 ABC01507 ABC01508 ABC01509 ABC01510 ABC01511 ABC01512 ABC01516 ABC42085
JLOC1JLOC1_39813.121972e-211715 - 17749758 / 60plus
Harvest21ABC516184853e-25426 - 48510060 / 60plus
Harvest21ABC0150718986e-221567 - 16269758 / 60plusABC01507
Harvest35U35_497324853e-25426 - 48510060 / 60plus
Harvest35U35_1433818906e-221573 - 16329758 / 60plus



Contig Sequence (485 bp)

>U35_49732 485 Hv_44K_v2
TAAGATGAGCACAAAGGAGGTTGATGAGCAGATGATCAACGTCCAGAACAAGAACTCGTC
CTACTTCGTGGAGTGGATCCCCAACAACGTGAAGTCCAGCGTCTGTGACATCCCGCCGAC
AGGGCTCTCGATGGCGTCCACCTTCGTCGGCAACTCGACCTCCATCCAGGAGATGTTCCG
GAGGGTGAGCGAGCAGTTCACTGCCATGTTCAGGAGGAAGGCTTTCTTGCATTGGTACAC
TGGCGAAGGCATGGACGAGATGGAGTTCACCGAGGACGACATGTAAGGAGGGGGAGGTCT
GTGTGGTGCTTTGCTGGGTGGGGGTTCTAGGGGCAGAGTTTGATCTGTTTGGTGCTTTGT
TATGAATCTGTTTATCATCGCAACTACCGCTTGTACGCCACCGCCATTCTTCCTGCCTTT
CCTAAGCTTTGTATTTTCCACTTTATGGCACCTTCTGGGTATTGTATCACTTGATGCCGT
ACGGT



Homology of Contig U35_49732 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None