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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_13610_PI390587928Hv_44K_v2ACGCCAAGATACTTGTAGCTATGAAATAGTGTTACTGCACCCAACAAAATTTGTGTTAAG617GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_55370.316402e-248 - 6710060 / 60minus ABC00825 ABC00991
MLOCMLOC_55370.215832e-2470 - 12910060 / 60minus ABC00825 ABC00991
MLOCMLOC_55370.114662e-24102 - 16110060 / 60minus ABC00825 ABC00991
JLOC1JLOC1_35708.125268e-252363 - 242210060 / 60plus
Harvest21ABC009918083e-2519 - 7810060 / 60minusABC00991
Harvest21ABC008257623e-2586 - 14510060 / 60minusABC00825
Harvest35U35_3447623e-25618 - 67710060 / 60plus



Contig Sequence (762 bp)

>U35_344 762 Hv_44K_v2
GCACGAGGTCAAAACATTTAATGATGCCCTGGACACAACACAGACAATCATTTGGAATGG
ACCAATGGGTGTCTTTGAATTTGACAAGTTTGCAGTAGGAACGGAGGCTGTTGCAAAGAA
GTTGGCCGAGCTTAGCAAAAAGGGGTTTTCGACACAGGAGATGGTCGTTTTATCTGGAGC
TCACACAATTGGGGGTAAAGGATTTGGGAATCCAAATGCTTTTGATAACGCCTATTTCAA
AGTACTCCTTGAGAAGCCACGGCCGACTTCATCTGGCATGCCGATAGGGCTGCCCACGGA
CTGGGCACTCACTGAAGATGATGAATGCTTGAGGTGGATCAACATCTATGCGGAGGACCA
GGATAAATTTTTCGCCGATTTCAGAGATGCATATACCAAGCTTGTAAACAGTGGAGCCTC
GTGGAGAACAACTTAGCTAGAATTACCTAGTTTTTTCGTCGAAATGGAGGTGTCACCCTA
GCCTCTACAGGATCGATGCACGCAACTGTAGAAGTTTTGCTACATGTGTAAGATTCGTGC
AAATTTTGCTCACAGCATATCCTTGCCCGTTCTGTAGTGATTCACTGCTGCCCTATCTCC
CGCTCGTTGTTGCCAAAACGCCAAGATACTTGTAGCTATGAAATAGTGTTACTGCACCCA
ACAAAATTTGTGTTAAGTTAGCAGTTAAATACATAATATTCAAGTCAGATTAATATACGG
TNNANAAAAAAAAAANAAANNNAANNANAAAAAAAAAAAAAA



Homology of Contig U35_344 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os08g41090.13322e-55protein|peroxidase precursor, putative, expressed
Brachypodium v1_2Bradi3g40330.13303e-62
Arabidopsis v10None