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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_13539_PI390587928Hv_44K_v2GTGATTCTCCTATTCTGCATCTTCCAGTTTATCCATGGCCAGCCTGATGACCTAGTATCA378GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK251360.120102e-2488 - 14710060 / 60plus ABC02848
MLOCMLOC_51740.111139e-22729 - 78310055 / 55minus None
MLOCMLOC_51740.53139e-2255 - 10910055 / 55minus None
MLOCMLOC_51740.26569e-22273 - 32710055 / 55minus None
MLOCMLOC_51740.44489e-2264 - 11810055 / 55minus None
MLOCMLOC_51740.35389e-22273 - 32710055 / 55minus None
JLOC1JLOC1_33079.16085e-22213 - 26710055 / 55plus
Harvest21ABC384016643e-25379 - 43810060 / 60plus
Harvest35U35_426246643e-25379 - 43810060 / 60plus



Contig Sequence (664 bp)

>U35_42624 664 Hv_44K_v2
GCCGTCGTCCCCCGGCGCGCCGGCGCCCTCGGAGTACGTGCTCCTCCGCCTACCCCGCGC
GTACCTCCACCTCATCGATCGCCGGCGCAGCCTCCCGGTCACCGTCGTCAAGCTCGACCC
TGCCACTACTCCTTCTCCCTCACCGTCCCCGCCTCCCCCGACGTGCGTGCATGCGTGCGT
GCGGGTCTCCTGCTGCTGCCAACTGAGACTGGCCGTGGATGAGGAGGGGAGACGGCGACG
ACAAGCTGCAGAATAGCACGGTCATAACATGGATGCATTAGTATATTTGGTCTGTGGAGA
TGCATATAGTCTCTGCCTCTTATCTCGTGGAGGTAGTTATTCTTACAAGGGTGAGCATGA
AGCATGGATCTATGCGTTGTGATTCTCCTATTCTGCATCTTCCAGTTTATCCATGGCCAG
CCTGATGACCTAGTATCAACCAACAACGGTTCCTCCTGGAGCTCAACCCTGGGGTACAGT
CCCAGGTCAGGGCGCTCCTCTTGTGTCACCAATGGTGCAGCCTGGGCATCAGCCTCTCTC
AGCTTCAGTGCCCTCGTGAGTTCAACTGAACCTAGCTCTGCAGATTGGCAAAAACACAGT
TCAGGGGATGGATGGATAAGCTTTAAATGCACGCCCGACAAAAGATGACTTTTAATGATA
TCTT



Homology of Contig U35_42624 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None