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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_12948_PI390587928Hv_44K_v2ATAAGAGTTAGTGTGTGTGTACTTGTGTAACATAATTTGATCTCAGGTCTCGTAAGAGTA38GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36049628313e-222707 - 27659858 / 59plus ABC18976 ABC26649
Harvest35U35_352438753e-2539 - 9810060 / 60minus



Contig Sequence (875 bp)

>U35_35243 875 Hv_44K_v2
GGCGAATTGGGCCCTTTCCAAGATGCTCGAGCGGCCGCTACTCTTACGAGACCTGAGATC
AAATTATGTTACACAAGTACACACACACTAACTCTTATAAATAGTAATCAGCGCAACAAA
TTCTTAAATTACAGTATTCCCTGTAAAGCAAATAGTACCATGTAGCAGAGCAACTAACAC
CACTTCCTCTGTGATGCCCTTGCGTTTAACAGAAGATTCCCTCTTGCATTGGTAGCCAAA
TGTCATGATATAACAGTTCCCTGACAGCTAGCTCTCTTCCTCGTCAGTGTAGCTTTCTTC
CAACTCGGTCCCGGATAGATAACCTGGGATGATTGGGATGGCTATTTGCCTCGCTCCTTA
AACAAGCAGCTGCAGCAGAGCAGATTACGGAAGATGTGCCTACATAATTGCAAAGAGTAA
ACATGGCATCTCTCAGACACGGGAGGTGGCCAAGTCCCAAGTAGAACCCATACTCTTCTG
CCATTGAAACAAAAAACGGCACCACAAGCTTCTCCAGCTTTGGCAGTGCCCCTTCTTCAA
ACGTCAAGTAAATTGCACTTTCCCAGCAGATTAGGTATAATTCCTTCAAACACGGAAATG
CAGTGCCTTGTATGGCAAGCCTTTCTTTTTGGAAAGTATTGAATGTTAGCGGCCGCTAGG
ATTTCTAGCGTTTATGGACTATGTAATATCTTTGGCATTATCAAGCAAAGGCATATTTTG
GCATTTTCTCTGGTTTTTTCGTATATTCATGGCTTTATGTTTATCCTATGTGAACTCATA
AGGTTATTTATAATTCTGAGATATATTTCCCTGTTTTTATTCTAATTTTCCGTACAATTG
TTTTCTCAGCTGCACACCAAAAGCATACGAATGGG



Homology of Contig U35_35243 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None