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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_11626_PI390587928Hv_44K_v2CAAACAAACAAATTGTGACTCTCTGTTGGGTGGGTAACGAAATGCCAATTGGAGCCCTCA510GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK251535.124852e-242409 - 246810060 / 60plus ABC41710
MLOCMLOC_58712.520727e-23202 - 2619859 / 60minus ABC12425 ABC41710
MLOCMLOC_58712.618007e-23111 - 1709859 / 60minus ABC41710
MLOCMLOC_58712.716837e-2326 - 859859 / 60minus ABC41710
MLOCMLOC_58712.921793e-221 - 599858 / 59minus ABC41710
MLOCMLOC_58712.814063e-221 - 599858 / 59minus ABC41710
Harvest35U35_174098123e-25511 - 57010060 / 60plus



Contig Sequence (812 bp)

>U35_17409 812 Hv_44K_v2
CTCCTATAGGGCGAATTGGGCCCTTTCGAAAATGCTCGAGCGGCCGCTGGGATCTCCATC
AAATCCAGAAGCGAACTGCAATCATTTTCAATGGGCCTCTGTAAAATCTAAAGGGAAGCG
TCAATGACAGTTTTTTTGTTTGTCAGTCATTTTTGCTGTTGCCGTGCAGGTCAAATGACT
CCTTTCAGCAGTTGCTTCAAGTAATATCAGCATTTCCCTAAGAAATGTGCGGGTGCTTTT
GTTGGACAATTTAGTTTATGTTTGTGCTAACTTCTGTTTTGTCCCCAGAAGCCCTGGACA
CTCGTCACTTTGTGCTTCGCATGAGTCTGATGTATCGCCTGCTCCCATGTTGTGAGCAAG
ATGGTCCTTATTCAGTGCAAATTTCTTTACTAACAAAGGTACATAGTTTATCCTTGTTGA
GTTCTAGTTAATTAGATGGTTCTTGTACCCAATACCCCCCTTTTCTTTCTTGAAGAGAAG
TAGCCTCCTCCTTTGTTGTAACTTCCAAGCCAAACAAACAAATTGTGACTCTCTGTTGGG
TGGGTAACGAAATGCCAATTGGAGCCCTCATGTGGTTCTGTAGCGGCCGCTGTATGACAC
AACTCCAAGATGCTCAAAAAGTTGCTGAAGTGACCTCGGAAGTTACCGAGCGTGAACTTG
AGCTTGAAGCTCAGTTAGTTGAAGCCAGAAGCATCATCCAAGAGCAGGCGTCCATCATGT
CTAAGCACTTCTCCAAGTCTGATAAACCAAGGAGGTTAAGTGGCCTGNATGCCGAGCATG
AGGCGATTCATTCTGCTTCTACAGATGTGTAA



Homology of Contig U35_17409 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None