- Probe CUST_10998_PI390587928
- Source Contig U35_24715
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_10998_PI390587928 | Hv_44K_v2 | GCCTCCACATGTAATTTATCTTATCATATGGACATGCTGGAATTTATTCAGCATTCAGTT | 634 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_22342.22 | 2916 | 2e-24 | 2849 - 2908 | 100 | 60 / 60 | plus | ABC20714 |
| JLOC1 | JLOC1_15488.27 | 4021 | 8e-25 | 3943 - 4002 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.26 | 4544 | 8e-25 | 4466 - 4525 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.25 | 4370 | 8e-25 | 4292 - 4351 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.24 | 3413 | 8e-25 | 3335 - 3394 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.23 | 2449 | 8e-25 | 2371 - 2430 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.22 | 3074 | 8e-25 | 2996 - 3055 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.21 | 3883 | 8e-25 | 3805 - 3864 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.20 | 4022 | 8e-25 | 3944 - 4003 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.19 | 3713 | 8e-25 | 3635 - 3694 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.18 | 2582 | 8e-25 | 2504 - 2563 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.17 | 3969 | 8e-25 | 3891 - 3950 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.16 | 2625 | 8e-25 | 2547 - 2606 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.15 | 3011 | 8e-25 | 2933 - 2992 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.14 | 4046 | 8e-25 | 3968 - 4027 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.13 | 2948 | 8e-25 | 2870 - 2929 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.12 | 2692 | 8e-25 | 2614 - 2673 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.11 | 3598 | 8e-25 | 3520 - 3579 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.10 | 4038 | 8e-25 | 3960 - 4019 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.9 | 3975 | 8e-25 | 3897 - 3956 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.8 | 3535 | 8e-25 | 3457 - 3516 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.7 | 4607 | 8e-25 | 4529 - 4588 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.6 | 3044 | 8e-25 | 2966 - 3025 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.5 | 3613 | 8e-25 | 3535 - 3594 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.4 | 2997 | 8e-25 | 2919 - 2978 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.3 | 3655 | 8e-25 | 3577 - 3636 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.2 | 3654 | 8e-25 | 3576 - 3635 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.1 | 4779 | 8e-25 | 4701 - 4760 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC20714 | 715 | 3e-25 | 23 - 82 | 100 | 60 / 60 | minus | ABC20714 |
| Harvest35 | U35_24715 | 716 | 3e-25 | 635 - 694 | 100 | 60 / 60 | plus |
Contig Sequence (716 bp)
>U35_24715 716 Hv_44K_v2 AGTATTTCAAGCGACGAGCCTTCTGATAATGCAAAAAGGAGAAAGAGTCATTCTCGTAAA AACAGCATGTCTCCGTCACCTCCAAAATCTAGGAGCAGACGAGTTTCGCGGTCTCCACCT AGCAAGCATTCTCACCGCAGGCATTCACCTTATTCATCTGCTGAAAGGAAGAAGCGGTCG AGATCCAGAACTCCGGTCAAGAGGAGGTAGAAGAAACTAGCTGGTTTTGTTTGTTTCACC TAGGGGTGCTTGCCCTTTGTCCTTCCGATGAAGAAACAGCATTTGCACGCCCACGAAACA AGATGCTGGATCTAGCTTCCAACAAAGAAGACGACTCGACGGCTCACGTGATGGATGTTG TTTGAAGGATGATGCATGGTGCCCAGCGGAAGATATGTCCGGTTTGCCAATATTAGGATA TGTAATGTCTTGTACAAGCAGCAGACTTCATAATTTGTAGCGCTAGCGTCCCTTTTAACT ATTTTATTACTTGTATTTTCTCTTAAGGTCATGTATTATTAGTATGCAAGGAGACTGGTC GAGTTTCGTCGTGACATGCTGCGATGTAATTTTGTATGGTTATATGCACTAGCCTATCCC TGAATCATAATTAGGTCTGGAAAATGTGTTGCAGGCCTCCACATGTAATTTATCTTATCA TATGGACATGCTGGAATTTATTCAGCATTCAGTTGCAGTAAAAAAAAAAAAAAAAA
Homology of Contig U35_24715 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |