barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_10960_PI390587928Hv_44K_v2CATACATGCTTCCGTGTAATAATGTAACTGAATAATACTATCTGTGTGATGTATGGTGCA339GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_19160.15162e-2493 - 15210060 / 60minus ABC00051 ABC00255 ABC00507 ABC43663 ABC48315 ABC52587
JLOC1JLOC1_13290.16068e-25389 - 44810060 / 60plus
Harvest21ABC002555423e-25465 - 52410060 / 60plusABC00255
Harvest21ABC436633806e-22305 - 3649758 / 60plusABC43663
Harvest35U35_146064173e-25340 - 39910060 / 60plus



Contig Sequence (417 bp)

>U35_14606 417 Hv_44K_v2
CCACCTTGGAAGGTCTTAATCTGTCATACAACCCTCTTAGTCTCTCACACAAGAAACTAA
ATGGATCGGTCCATGAAGGTCTTTGTGGTCGTCCTCCTGCTTCTTGCGGCCACAGAGTTC
CAGGGAGCAGTGCAGGTAGCTTTGGCGAGGGAGTGTAGGTCAGACAGCAAAAAGTTTGTG
GGGCTGTGCGTGAGCGACACCAACTGTGCAAGTGTGTGCCTGACCGAGCGTTTCCCCGGA
GGCAAGTGCGACAGCATTCGGAAGCGTTGTGTCTGCACCATGAACTGCTAGATGTTGTGT
CTGCACCATGAACTGCTAGATGGCCCTGTTTTCTTCTTGCATACATGCTTCCGTGTAATA
ATGTAACTGAATAATACTATCTGTGTGATGTATGGTGCAAAAAAAAAAAAAAAAAAA



Homology of Contig U35_14606 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None