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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_10483_PI390587928Hv_44K_v2CGTCGTGTATTTATTTTACTTTGGGTCTTGTTATGTGGAGAAATAATATTGGAGACTTGG20GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35731412872e-241200 - 125910060 / 60plus ABC02893 ABC02895 ABC49716
MLOCMLOC_36760.232202e-241589 - 164810060 / 60plus ABC02893 ABC02895 ABC49716
JLOC1JLOC1_23714.117628e-25917 - 97610060 / 60plus
Harvest21ABC0289314893e-251209 - 126810060 / 60plusABC02893
Harvest21ABC497161598e-2156 - 1119855 / 56minusABC49716
Harvest35U35_415425923e-2521 - 8010060 / 60minus
Harvest35U35_1375214893e-251209 - 126810060 / 60plus



Contig Sequence (592 bp)

>U35_41542 592 Hv_44K_v2
TTTTTTTTTTTTTTTTTAATCCAAGTCTCCAATATTATTTCTCCACATAACAAGACCCAA
AGTAAAATAAATACACGACGACAGGAAATATAAAAGGTGAACAAAAACAGATGTGAAGTG
CCTAATATAGAGAAGCCTAATTCAGATATTGGCTATCCTCTCTTCGTTGCAGCTCAATTC
TCCTCCCTTAGATCGGCATGCCTTTGGGCACAATCTGGTCCTTTATCCACATGTAAATAG
GCACCAGAACATAGTACGCAGCACATATCGTTCCCATGAGGAAGCGGAAGAAAAAAGTGA
TAGGATTCACAGGCTTGCTAACATCTTCAGCCTTCGGACCAAGCTGTAAAGGGGAGTCCC
CACTTTCTTTCTTGACACCAGTCACGGAGCACCCCATGATGAGGCCATGCCTACGGACAC
CACGGTACCACTTTGGTCCAATCCTCTTGAGCTGAACATCCTTGAAGGAGGGCATCCCCC
CGGACCAGCAGCGCCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGGCTG
ACTACAACATCCAGAAGGAGTCCACCTCCACCTTGTCCTCCGTCTTAGGGGT



Homology of Contig U35_41542 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os12g42090.23495e-57protein|methyltransferase domain containing protein, putative, expressed
Brachypodium v1_2Bradi4g01640.13511e-57
Arabidopsis v10None