barSeed - Barley Seed Development Database

Probe ABC53024

Source Contig ABC53024

barSeed

Links

Affymetrix Source Sequence (1136 bp)

>ABC53024 1136
GACAGCCGCCCGTCTTGCTCGAGATTGACCTTTGGTGACCATTAGAAACCAGAGACACTG
AAGATGGCGCAGCCTGCTGAGCTTTCCCGTGAGGAGAATGTGTACATGGCTAAGCTTGCA
GAGCAGGCTGAGAGGTACGAGGAGATGGTTGAGTTCATGGAGAAGGTGGCCAAGACGGTT
GACTCCGAGGAGCTCACCGTCGAAGAGCGCAACCTTCTATCAGTTGCTTACAAGAATGTT
ATTGGTGCCCGCCGTGCCTCGTGGCGCATCATTTCCTCCATCGAGCAGAAGGAAGAGAGC
CGTGGCAACGAGGACCGTGTCACACTCATCAAGGACTACCGTGGAAAGATTGAAGTTGAG
CTCACTAAGATTTGTGATGGTATCCTCAAGCTTCTTGATTCCCACCTTGTCCCCTCATCT
ACCGCTCCAGAGTCCAAGGTCTTCTACCTGAAGATGAAGGGTGATTACTACAGGTACCTT
GCAGAGTTCAAGAGTGGAACTGAGAGGAAGGATGCTGCTGAGAACACCATGGTGGCATAC
AAAGCTGCTCAGGAGATTGCACTGGCAGAGCTGCCCCCGACTCATCCTATTAGGCTTGGG
CTGGCACTCAACTTCTCGGTGTTCTACTATGAGATCCTCAACTCTCCTGACCGTGCTTGC
GACCTCGCCAAGCAGGCTTTTGACGAGGCCATCTCGGAATTGGACTCACTGAGCGAGGAG
TCCTACAAGGACAGCACTTTGATCATGCAGCTTCTCCGTGATAACCTGACGCTGTGGACT
TCCGACATCTCGGAGGACGCTGCTGAAGAAATGAAGGATGCTCCCAAGGGTGAATCTGGA
GATGGACAGTAAACATTGTCTATGTGTCCAGAAACTTGTCTTTCTTGCTTGTTCAGTGTA
GATTGTAATGTCGTCAGTGTGGTTGTTGGTAATTGGAGGCTCCAATTTGTGTTGTGATAG
GGAAGCTTGTAGCTGCCTGCCTTGCTTGGTTATCGGGCTGCACTGGTTATTGCCTCTTGT
TGAACCTTCCTGTTACTTTGGTGGTTCTAGAAATTTCTGCTGCTCTTGTCTGTGTGGCCC
CTTGTCTATTCATCTGCTTTTCTTCTTTAGGAAGGGCGTCTTCTGAACCCTTTCCA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_61457.1	1394	0.0	1 - 1017	99	1014 / 1017	CUST_34988_PI390587928	ABC01539 ABC01543 ABC53024
MLOC_56778.3	1047	0.0	138 - 877	87	648 / 741	None	ABC01542 ABC01543 ABC53024
MLOC_56778.1	1896	0.0	267 - 1006	87	648 / 741	CUST_25408_PI390587928	ABC01542 ABC01543 ABC29795 ABC53024
AK366373	1352	9e-100	122 - 822	77	548 / 716	None	ABC53024