barSeed - Barley Seed Development Database

Probe ABC52942

Source Contig ABC52942

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Affymetrix Source Sequence (517 bp)

>ABC52942 517
GTAGATTTCAGCATTTCAAATCCAACTTTTTTTGCATCAAGCATTTTTAGGTCCAGAGGA
ATTTCCTGAAATTGTGGGGCAAGGGGCCTATTTCCAAGAGACAGGTTGGATGAGACATAT
GCTTTGATGGAAGCCTCCCCCATAGTGAAGCCAGTGTCCCCAGTAAAATGAATAGGGGTT
TGTACTTTTTTTGAATAAAATTCATGGATAAGGGTTTTACCCTCGTGCCGAATTCGGCCC
GAGGGGGTGAACATCCCGCAATATTGCCCCCCCCCCCCGGGCAGCCCCATCCCCCCCCCC
ATTTTCAGCATCCCCATGGCAGCTACCTGGGCCGGGGGGGTTTGGTAAAATTTGTAATGG
GGTAGGTAGATCGATCCCCGTTTAGTTGATCGATGAAGAGCTTCAAAATAAAAGGGCCCT
ACGTCTTCATGGGTGGCCGGGACTATTGCAACTTGAAAAAAAAAAACCTCTGTTTTTGAA
TAAAGCTTTTGTCCGAAAATAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK358798	1345	2e-88	448 - 669	93	207 / 222	None	ABC05966 ABC52942
AK361929	1180	2e-88	508 - 729	93	207 / 222	None	ABC05966 ABC52942
MLOC_71607.1	1338	2e-83	583 - 804	92	204 / 222	None	ABC05966 ABC52942