barSeed - Barley Seed Development Database

Probe ABC50975

Source Contig ABC50975

barSeed

Links

Affymetrix Source Sequence (635 bp)

>ABC50975 635
TGATTGCAATGCTGCANAAAGGGTTTTATGACAGGGTTGAAGATGGCAGCATTATTCTTA
AGAAATCCAAGCGGTTCAGCTTCTGCAGTGATGGGATCATCCTGGAGGATGGAGAAGAAA
GCATAAAGAGTGATATCGTAATTCTAGCAACAGGATTCAAAGGAGACCAGAAGCTCAGGG
ACATCTTCACAGCAAACTGGTGCAGAAATATAGTGGCAGGATCATCAGATACATCGGTTC
CACTATACAGTTGGCAATAGTCGGATATTCCGAGAGCCTTACCGACATATATGTCTCAGA
GAGGATAGCTAATTGGGTAATCCATTTCCTGGCTGGTGGCTTCCAGTTGCCAAGCATAAG
ACGCATGGAAGGGAGTGTAGCAGAGTGGGCAAAGTACAAGAATCTTTACAATGGAAAGTA
TTTTAGACGATCTTGTTTAAGCACTGTGAATATTTGGTTTAATGATTTGTTGTGCCAAGA
TATCGGATGCAATCCTAGAAGAAAGAAAGGATTCCTCGCTGAATGGTTCCAGCCATATGG
ACCTGCTGATTATGCAGGCCTTTCCTGAAGACAGTAGCATATCTGTCACTTGTGTACTCA
TAGCAAAAGAATAAGACAAAAGAGCTGCTACCTAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_11897.1	1920	0.0	1150 - 1810	95	630 / 661	CUST_16249_PI390587928 CUST_37335_PI390587928 CUST_14945_PI390587928	ABC13704 ABC21141 ABC26541 ABC50975
MLOC_11897.2	3330	4e-126	1871 - 2120	99	248 / 250	CUST_16249_PI390587928 CUST_37335_PI390587928 CUST_14945_PI390587928	ABC13704 ABC21141 ABC26541 ABC50975
MLOC_11896.2	1965	0.0	1006 - 1666	85	563 / 664	CUST_11017_PI390587928 CUST_10076_PI390587928	ABC13704 ABC21141 ABC26541 ABC50975