barSeed - Barley Seed Development Database

Probe ABC47740

Source Contig ABC47740

barSeed

barSeed Home
List Cluster Sets
List Cell Wall Probes

Links

James Hutton Institute Home
BioSS Home

Affymetrix Source Sequence (518 bp)

>ABC47740 518
GATCGACAGCGACTCTACCAGCGGGAAGACTACCCCGGCAGCATACAGGGCCGCCGCCGA
GAAGATTTGCCGGCTGAGCTTGGAGGAAGCAAAGGCTTTGTACCCAAGGGCCCGAGCCAC
CGACGTGCCCTACCTTTGTATGGACCTCGTCTACCAGTACTCCCTGCTCGTGTATGGATT
CGGTTTGGAACCGACGAAGGTGATCACAGTGGTAGAGAAGGTGAAGCACGGCGAATATTT
CATTGAAGCCGCATGGCCTCTCGGAGAAGCTATAGAAGCTGTGTCACCCACCAAGCGGCT
CCAAGATGCATGATTTAAATGGTAGCTAGTCCTTCACAATAAGGTGCCCGTGCCCTCGCA
ATAAGATGCATGAATGGACCGCGCTATCCCCAATTCTAGTGTTCTTTACTATTTGACATA
CCGAGTAAACGGCATAGACGAGCACACTGATACACTCGTACATTGGTTATTCAAAACTAG
TTTCGTGATGCTGTAAGATTGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_76813.1	1780	0.0	1255 - 1760	99	505 / 506	CUST_22134_PI390587928 CUST_34439_PI390587928	ABC03332 ABC47740
MLOC_16300.1	1667	3e-61	1232 - 1545	80	252 / 314	None	ABC03332 ABC13623 ABC47740